Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq2 102 3e-16 >seq2 Length=5759010 Score = 102 bits (112), Expect = 3e-16 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || |||||||| |||||||| ||||| || |||||||| || || ||||||||| Sbjct 4160042 ATGCAGATCTTCGTTAAGACACTGACGGGTAAGACGATTACTCTGGAAGTGGAATCATCT 4159983 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || | || || ||||| || ||||| || || |||||||| || Sbjct 4159982 GATACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGTATCCCTCCTGACCAG 4159923 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | |||||| | || || || || ||||| || | ||| || || || || Sbjct 4159922 CAGCGCCTGATTTTCGCTGGTAAGCAGCTGGAAGACGGTCGGACTCTGAGCGACTACAAC 4159863 Query 391230 ATTGATAAGGA 391240 || | ||||| Sbjct 4159862 ATCCAGAAGGA 4159852 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975718070919404