Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq7 251 9e-62
>seq7
Length=2761852
Score = 251 bits (278), Expect = 9e-62
Identities = 931/1437 (65%), Gaps = 39/1437 (3%)
Strand=Plus/Minus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|||||| ||||| ||||||| || || | || ||| || || || ||||| ||||
Sbjct 710869 CCACAGCACATGATCATGCGAGTGGCCGTTGGCATCTGGGGAGACGACATTGAGCGTGTT 710810
Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731
| ||||||||| || |||||| | | |||| ||| || | || |||||||||
Sbjct 710809 CTCGAGACATACCACCTCATGTCCAGCAAGTTCTTCACCCATGCCTCCCCCACCCTCTTC 710750
Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791
|| |||||||| || | |||| ||||| || ||||| | | | ||||| ||
Sbjct 710749 AATGCTGGTACCCCGCAAGCCCAGCTGTCCTCATGCTTCCTGGTCGACATGAAGGACGAC 710690
Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851
|| | || || |||| |||||| | |||||| ||||| ||| |||||||
Sbjct 710689 AGCATTGAGGGTATCTACGACACTCTGAAGACGTGTGCCATGATCTCCAAGATGGCTGGT 710630
Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACAA 111909
||||| || || || |||| || | |||| | | ||| || || || || |
Sbjct 710629 GGTATTGGTTTGAACGTCCACCGCATCCGTGCCACC--GGCTCCTACATTGCCGGCACCA 710572
Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969
| || || | || ||||| || ||||| || || || ||| ||| || || || |
Sbjct 710571 ACGGCACCTCCAACGGCATTATCCCCATGCTGCGAGTCTTCAACAACACTGCTCGATACG 710512
Query 111970 TAAACCAAGCTGGGCGTCG-CAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGG 112022
| |||| ||||| | |||| | || | || |||| || ||||| |||
Sbjct 710511 TCGACCA----GGGCGGCAACAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCCTGG 710456
Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGC 112080
||||| || || | || |||||||| | || ||||| ||| | ||||||| |||
Sbjct 710455 CACGCCGACGTCTTTGACTTCCTTGATCTCCGCAAGAACCACGGTAAGGAGGAGGTTCGC 710396
Query 112081 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140
| | ||||| || ||| || || |||||||| ||||||||||||||| | || |||
Sbjct 710395 GCT--CGCGACCTGTTCCTTGCCCTGTGGATTCCCGATCTCTTCATGAAGCGTGTCGAGA 710338
Query 112141 AGA--GTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCG 112197
||| ||| | ||| | ||| | || || || || || || || || | || |
Sbjct 710337 AGAACCTGG--ACTGGACGCTCATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACTGCT 710281
Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCG-GGCGACTGCG 112256
|| ||||||||||| || || ||| |||||||||| || | || ||| | |
Sbjct 710280 ACGGCGAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGAGCGAGGGACGTGGCCGC-AAG 710222
Query 112257 ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 112315
|| | | ||| | || | ||||| | | || || || |||| |||||||| ||||
Sbjct 710221 ACCATCCGCGCT-CAGAAGCTGTGGTACTCCATCCTGGAGGCTCAGACCGAGACCGGTAA 710163
Query 112316 ACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 112375
|| | ||||| ||||| || ||| |||| ||||| || || ||||| ||||
Sbjct 710162 CCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAAC 710103
Query 112376 GATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 112435
||| || || |||||||| || || ||| | || | | | |||||| ||
Sbjct 710102 TATCCGCAGCTCTAACCTCTGCACTGAGATCATCGAGTACTGTGCCCCCGATGAGGTTGC 710043
Query 112436 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGA-CAT 112494
||| || ||| | || || | || |||||| | || || | | | || || |
Sbjct 710042 TGTCTGCAACTTGGCCTCTCTGGCCCTCCCCGCCTTCGTCGA-CTACAACGAAGGATGCT 709984
Query 112495 TTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTA 112554
|| | | || || |||||||| || || ||| ||||| ||| | | |
Sbjct 709983 ACGACTTCAAGAAGCTTCACGAAGTCACCAAGGTGGTCGTCCGTAACCTCAACCGCATCA 709924
Query 112555 TTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 112614
||||| || |||||| || || || || || || ||| | ||||| || |
Sbjct 709923 TTGATGTGAACCATTACCCTGTCCAGGAGGCCCGCAACAGCAACATGCGCCACCGACCTA 709864
Query 112615 TTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGAT 112673
||||| ||||||| || ||||| || || | ||| | || || || | | |||||
Sbjct 709863 TTGGTGTCGGTGTTCAGGGTCTTGCTGACGCGTTCCTCGCTCTG-CGTCTGCCCTTTGAG 709805
Query 112674 TCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTT 112733
|| || || || | || || || || ||||| || || || ||||| |||
Sbjct 709804 TCTCCTGAGGCTCGCGAGCTGAACAAGCAGATCTTCGAGACCATTTACCATGCCGCCCTT 709745
Query 112734 GAGGCGAGTTC---GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 112790
||||| ||| |||| | || || |||| || || || ||| | || |||| ||
Sbjct 709744 GAGGC---TTCCATGGAGATTGCCAAGATTGAGGGCCCGTACGAATCGTTCAAGGGATCA 709688
Query 112791 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTAC 112850
|| || || | || | || || | ||| |||||||| | || || | |
Sbjct 709687 CCCGCATCTGAGGGCATCCTGCAGTATGACATGTGGGACGTCAAGCCCTCCGACCTGTGG 709628
Query 112851 GACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 112910
|| |||||| | |||||||| | ||||||||| | ||| | || ||||| | | |
Sbjct 709627 GAGTGGGACTCCCTCAAGGAGCAGATCAAGGAGCACGGTGTCCGCAACAGCTTGCTCGTC 709568
Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970
|| || ||||| || ||| ||| | || ||| |||| || || |||||||| || |||
Sbjct 709567 GCTCCCATGCCCACTGCCAGCACTTCTCAGATCCTGGGCAACAACGAATGCTTCGAGCCC 709508
Query 112971 TACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 113027
||||| | |||||||| | | || | ||| || || ||||| | ||||||||
Sbjct 709507 TACACTTCCAACATCTACCAGCGACGTGTCCTTGCTGGTGAGTTCCAGGTTGTCAAC 709451
Score = 114 bits (126), Expect = 2e-20
Identities = 122/161 (76%), Gaps = 0/161 (0%)
Strand=Plus/Plus
Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230
|||||||| |||| || | || ||||| || ||||||||||||||| ||| ||
Sbjct 1551211 TCCTTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCAGCGGTGCC 1551270
Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290
|| | | || | |||||||||||||| ||||||||||| || || ||| ||||||
Sbjct 1551271 TTTGCCTCCATCTTCTGGCTCAAGAAGCGGGGTCTCATGCCCGGCCTGACCTTTTCCAAC 1551330
Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331
||||| ||||| ||||||||||| || ||| || |||||
Sbjct 1551331 GAGCTCATCTCGCGTGACGAGGGTCTGCACACGGACTTTGC 1551371
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620742299129360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |