Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq7 251 9e-62 >seq7 Length=2761852 Score = 251 bits (278), Expect = 9e-62 Identities = 931/1437 (65%), Gaps = 39/1437 (3%) Strand=Plus/Minus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 |||||| ||||| ||||||| || || | || ||| || || || ||||| |||| Sbjct 710869 CCACAGCACATGATCATGCGAGTGGCCGTTGGCATCTGGGGAGACGACATTGAGCGTGTT 710810 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 | ||||||||| || |||||| | | |||| ||| || | || ||||||||| Sbjct 710809 CTCGAGACATACCACCTCATGTCCAGCAAGTTCTTCACCCATGCCTCCCCCACCCTCTTC 710750 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 || |||||||| || | |||| ||||| || ||||| | | | ||||| || Sbjct 710749 AATGCTGGTACCCCGCAAGCCCAGCTGTCCTCATGCTTCCTGGTCGACATGAAGGACGAC 710690 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 || | || || |||| |||||| | |||||| ||||| ||| ||||||| Sbjct 710689 AGCATTGAGGGTATCTACGACACTCTGAAGACGTGTGCCATGATCTCCAAGATGGCTGGT 710630 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA--TTAGAGGTACAA 111909 ||||| || || || |||| || | |||| | | ||| || || || || | Sbjct 710629 GGTATTGGTTTGAACGTCCACCGCATCCGTGCCACC--GGCTCCTACATTGCCGGCACCA 710572 Query 111910 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 111969 | || || | || ||||| || ||||| || || || ||| ||| || || || | Sbjct 710571 ACGGCACCTCCAACGGCATTATCCCCATGCTGCGAGTCTTCAACAACACTGCTCGATACG 710512 Query 111970 TAAACCAAGCTGGGCGTCG-CAAGGGATCTA------TCGCAGTCTATCTTGAGCCATGG 112022 | |||| ||||| | |||| | || | || |||| || ||||| ||| Sbjct 710511 TCGACCA----GGGCGGCAACAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCCTGG 710456 Query 112023 CACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGG--CGC 112080 ||||| || || | || |||||||| | || ||||| ||| | ||||||| ||| Sbjct 710455 CACGCCGACGTCTTTGACTTCCTTGATCTCCGCAAGAACCACGGTAAGGAGGAGGTTCGC 710396 Query 112081 GGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGG 112140 | | ||||| || ||| || || |||||||| ||||||||||||||| | || ||| Sbjct 710395 GCT--CGCGACCTGTTCCTTGCCCTGTGGATTCCCGATCTCTTCATGAAGCGTGTCGAGA 710338 Query 112141 AGA--GTGGCAATTGGTCTCTCTTTTGTCCAGAC-AAGGCACCCGGTCTCTCCGATGCCG 112197 ||| ||| | ||| | ||| | || || || || || || || || | || | Sbjct 710337 AGAACCTGG--ACTGGACGCTCATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACTGCT 710281 Query 112198 TGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCG-GGCGACTGCG 112256 || ||||||||||| || || ||| |||||||||| || | || ||| | | Sbjct 710280 ACGGCGAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGAGCGAGGGACGTGGCCGC-AAG 710222 Query 112257 ACGGTGCCAGCTGCCGATG-TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTAC 112315 || | | ||| | || | ||||| | | || || || |||| |||||||| |||| Sbjct 710221 ACCATCCGCGCT-CAGAAGCTGTGGTACTCCATCCTGGAGGCTCAGACCGAGACCGGTAA 710163 Query 112316 ACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGT 112375 || | ||||| ||||| || ||| |||| ||||| || || ||||| |||| Sbjct 710162 CCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGAAC 710103 Query 112376 GATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGC 112435 ||| || || |||||||| || || ||| | || | | | |||||| || Sbjct 710102 TATCCGCAGCTCTAACCTCTGCACTGAGATCATCGAGTACTGTGCCCCCGATGAGGTTGC 710043 Query 112436 TGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGA-CAT 112494 ||| || ||| | || || | || |||||| | || || | | | || || | Sbjct 710042 TGTCTGCAACTTGGCCTCTCTGGCCCTCCCCGCCTTCGTCGA-CTACAACGAAGGATGCT 709984 Query 112495 TTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACAAAAAACCTAAACAGAGTTA 112554 || | | || || |||||||| || || ||| ||||| ||| | | | Sbjct 709983 ACGACTTCAAGAAGCTTCACGAAGTCACCAAGGTGGTCGTCCGTAACCTCAACCGCATCA 709924 Query 112555 TTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAA 112614 ||||| || |||||| || || || || || || ||| | ||||| || | Sbjct 709923 TTGATGTGAACCATTACCCTGTCCAGGAGGCCCGCAACAGCAACATGCGCCACCGACCTA 709864 Query 112615 TTGGTCTCGGTGTCCAAGGTCTCGCGGATGTATTCAT-TCTTTGTCGCCACGCATTTGAT 112673 ||||| ||||||| || ||||| || || | ||| | || || || | | ||||| Sbjct 709863 TTGGTGTCGGTGTTCAGGGTCTTGCTGACGCGTTCCTCGCTCTG-CGTCTGCCCTTTGAG 709805 Query 112674 TCCGACGAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTT 112733 || || || || | || || || || ||||| || || || ||||| ||| Sbjct 709804 TCTCCTGAGGCTCGCGAGCTGAACAAGCAGATCTTCGAGACCATTTACCATGCCGCCCTT 709745 Query 112734 GAGGCGAGTTC---GGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCT 112790 ||||| ||| |||| | || || |||| || || || ||| | || |||| || Sbjct 709744 GAGGC---TTCCATGGAGATTGCCAAGATTGAGGGCCCGTACGAATCGTTCAAGGGATCA 709688 Query 112791 CCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGGAAGGTGAGACCAAGCTTCACTAC 112850 || || || | || | || || | ||| |||||||| | || || | | Sbjct 709687 CCCGCATCTGAGGGCATCCTGCAGTATGACATGTGGGACGTCAAGCCCTCCGACCTGTGG 709628 Query 112851 GACTGGGACGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATG 112910 || |||||| | |||||||| | ||||||||| | ||| | || ||||| | | | Sbjct 709627 GAGTGGGACTCCCTCAAGGAGCAGATCAAGGAGCACGGTGTCCGCAACAGCTTGCTCGTC 709568 Query 112911 GCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCC 112970 || || ||||| || ||| ||| | || ||| |||| || || |||||||| || ||| Sbjct 709567 GCTCCCATGCCCACTGCCAGCACTTCTCAGATCCTGGGCAACAACGAATGCTTCGAGCCC 709508 Query 112971 TACACGACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 113027 ||||| | |||||||| | | || | ||| || || ||||| | |||||||| Sbjct 709507 TACACTTCCAACATCTACCAGCGACGTGTCCTTGCTGGTGAGTTCCAGGTTGTCAAC 709451 Score = 114 bits (126), Expect = 2e-20 Identities = 122/161 (76%), Gaps = 0/161 (0%) Strand=Plus/Plus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 |||||||| |||| || | || ||||| || ||||||||||||||| ||| || Sbjct 1551211 TCCTTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCAGCGGTGCC 1551270 Query 102231 TTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAAC 102290 || | | || | |||||||||||||| ||||||||||| || || ||| |||||| Sbjct 1551271 TTTGCCTCCATCTTCTGGCTCAAGAAGCGGGGTCTCATGCCCGGCCTGACCTTTTCCAAC 1551330 Query 102291 GAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 102331 ||||| ||||| ||||||||||| || ||| || ||||| Sbjct 1551331 GAGCTCATCTCGCGTGACGAGGGTCTGCACACGGACTTTGC 1551371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620742299129360