Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq7 295 8e-75 >seq7 Length=2761852 Score = 295 bits (326), Expect = 8e-75 Identities = 1034/1590 (65%), Gaps = 47/1590 (3%) Strand=Plus/Plus Query 109507 GACTGAGACTGATCGATGAATCGACCACGATCAGCCGCCATGTCGATGAT---ACACTTT 109563 ||||| ||||| |||||||| ||||||||| |||||||| | || ||| || || Sbjct 709245 GACTGGGACTGGTCGATGAAAGCACCACGATCGGCCGCCATCTGGACGATTTGACGCTGA 709304 Query 109564 TGGCTAATTTCCCAGACAGTCTTGTACAAATTCTTGATATCATCGGGAATGTCCACGATG 109623 | || |||||||| |||||||||| | |||||| || ||||| |||| |||| Sbjct 709305 GAG---ATCTCCCAGACGGTCTTGTACAGAGCCTTGATGTCCTCGGGGATGTTGGGGATG 709361 Query 109624 TTTTGAATAGAGCCACCAGCCTTCACCATGAGATCCTTCATCTCTTTCGACCAGAGACCG 109683 || || || ||||| | | ||| | | |||||| | | ||||| || ||| Sbjct 709362 TTCTGGATGGAGCCGTTCTCGGCAATGATGCGGTTCTTCATGGCGTCGGACCACAGGCCG 709421 Query 109684 ACCTTTTTGAGATCGTCAACAAGATGCTTGTTGACCACGACAAATTCACCAGCAAGTGTG 109743 | || || | | ||| |||||| || || ||||||||||| Sbjct 709422 GTGTCGACCAGGTCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCACCAGCAAGGACA 709481 Query 109744 CGTCGGAGGTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGT 109803 ||||| |||||||||| | |||||||| ||||| || || |||||||| ||||| || Sbjct 709482 CGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATCTGA 709541 Query 109804 GCAGTGGAAGCTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACCCTTCGTCTTT 109863 | |||| || |||||||||||||| | ||| | ||||| |||| ||| | | ||| Sbjct 709542 GAAGTGCTGGCAGTGGGCATGGGAGCGACGAGCAAGCTGTTGCGGACACCGTGCTCCTTG 709601 Query 109864 ACCCGCTCACGCATTGCGTCCCAATCATAACGACCACTAAATTTAGT-CTCACCATCCCA 109922 | | |||| | | |||||| || |||| || || | ||||| Sbjct 709602 ATCTGCTCCTTGAGGGAGTCCCACTC-------CCACAGGTCGGAGGGCTTGACGTCCCA 709654 Query 109923 CATATCTGGTTGAAGTACACCCTCAGCAGCAGGAGAACCCTTGAAACTCTCGTACGACCC 109982 ||| || || || | ||||||| || || || |||||||| ||||||| || Sbjct 709655 CATGTCATACTGCAGGATGCCCTCAGATGCGGGTGATCCCTTGAACGATTCGTACGGGCC 709714 Query 109983 CTCAACCTCGGCCAACTCGGATGAAGCCTCTAGTGCCGCATGATACATAGTCTCAAAAAT 110042 ||||| || ||| | ||| |||||||| || || ||||| || || ||||| || || Sbjct 709715 CTCAATCTTGGCAATCTCCATGGAAGCCTCAAGGGCGGCATGGTAAATGGTCTCGAAGAT 709774 Query 110043 ATGAGCATTCATGAGGCGAGACTCTTCACAGTCGAAGGGAAGACCACAAAGA-ATAAACA 110101 || |||| ||||| ||| | | || ||||| |||| || || | ||| Sbjct 709775 CTGCTTGTTCAGCTCGCGAGCCTCAGGAGACTCAAAGGGCAGACG-CAGAGCGAGGAACG 709833 Query 110102 CATCCGCTAGACCCTGAACACCGAGACCAATGGGGCGATGCTTCATGTTAGAGCGTCGAG 110161 | || || |||||||||||||||| |||||| || || || |||||| | || | Sbjct 709834 CGTCAGCAAGACCCTGAACACCGACACCAATAGGTCGGTGGCGCATGTTGCTGTTGCGGG 709893 Query 110162 CAGTTTCTACGGGGTAAAAGTTGCGGTCGATGACCCGATTGAGATTCTTCGTCACAGTCT 110221 | | || |||||| ||| || |||| || ||||| || || || Sbjct 709894 CCTCCTGGACAGGGTAATGGTTCACATCAATGATGCGGTTGAGGTTACGGACGACCACCT 709953 Query 110222 TCGTGATTTCATGGAGTTTGTCGTAATCGAACGTTTTCGTCTCCTTATT-GACATATTTG 110280 | |||| ||| || || || | | | ||| | | | | || || | ||| | | Sbjct 709954 TGGTGACTTCGTGAAGCTTCTTGAAGTCGTA-GCATCCTTCGTTGTAGTCGACGAAGGCG 710012 Query 110281 GGGAGAGCAATAGACGCAAGATTGCACACAGAAGTCTCGTCTTTGTCGGTGTATTCCAAA 110340 ||||| || | ||| || | ||||| |||| | ||| || | | ||| || | Sbjct 710013 GGGAGGGCCAGAGAGGCCAAGTTGCAGACAGCAACCTCATCGGGGGCACAGTACTCGATG 710072 Query 110341 ATTTCCGTACACAAGTTGGAACTCTTAATGACACCCAAGTTCTTCTGATTCGATTTGGAG 110400 || || || || | ||| || || || |||| ||||||||| || ||| | Sbjct 710073 ATCTCAGTGCAGAGGTTAGAGCTGCGGATAGTTCCCAGGTTCTTCTGGTTGCTCTTGCGG 710132 Query 110401 TTGCATGCATCCTTATAGAGCATGTATGGGGTACCAGTTTCCGTCTGTGACTTGAGAATG 110460 ||||| |||||| ||||||||| | ||| |||| || || ||||| | || || ||| Sbjct 710133 TTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGGTCTGAGCCTCCAGGATG 710192 Query 110461 GCCTTCCATA-CATCGGCGGCGGGGACAGT--TGCGTTAGCGA-GACCTTCCTCCTCGTA 110516 | | ||| | | || | | || ||| || |||| || | | || || |||||| Sbjct 710193 GAGTACCACAGCTTCTGAG-CGCGGATGGTCTTGCG---GCCACGTCCCTCGCTCTCGTA 710248 Query 110517 CTTGGTGTACAAGTCCTCAAATTCCTGTCCGTACACATCAGAAAGACCCTTCGCCTT-GT 110575 ||| ||||| ||||||| |||| ||||| |||| ||| || || || || Sbjct 710249 CTTTTCGTACAGAGCCTCAAACTCCTCGCCGTAGCAGTCAGCAAGGCCAGG-GCATTCGT 710307 Query 110576 CGGGACAGAAGAGGGACCAATTTCCACCCTC--CTCAACCCTCTTCATGAACAGGTCAGG 110633 ||| || | ||| | ||| | ||| || ||| || | ||||||||| || || || Sbjct 710308 TGGGGCACATGAGCGTCCAGT--CCAGGTTCTTCTCGACACGCTTCATGAAGAGATCGGG 710365 Query 110634 AATCCACATCGCCGAGAAAAGGTCACGGCAACGAGCCTCTTCATCACCTTGGTTGAGGCG 110693 |||||||| || ||| ||||| || ||| |||| || | ||| ||||| ||| Sbjct 710366 AATCCACAGGGCAAGGAACAGGTCGCGAGCGCGAACCTCCTCCTTACCGTGGTTCTTGCG 710425 Query 110694 TAGCTCCAAAAAGTCCATGATATCCGAGTGCCATGGTTCGAGATAGACAGCGATGGATCC 110753 || || | ||||| | || || | |||||| || ||||| |||| || | || || Sbjct 710426 GAGATCAAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACC 710485 Query 110754 CTTACGACGAC-----CCGCC-TGGTTAACATAGCGTGCTGTGGCATTGAAGACCCTGAG 110807 | |||| ||||| |||| || || || || ||| |||||||| | || Sbjct 710486 ---AGGACGCTTGTTGCCGCCCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACTCGCAG 710542 Query 110808 CATAGGAATAATTCCATCGGATTGACCATTTGTACCCCTAATTCTGGACTTATTGGCACG 110867 ||| || ||||| || | ||| || || || || ||| ||| ||||||| Sbjct 710543 CATGGGGATAATGCCGTTGGAGGTGCCGTTGGTGCCGGCAATGTAGGAGCCGGTGGCACG 710602 Query 110868 AATGTCGTGGATATGCATACCAATACCACCCGCCCACTTACTAATTTGTGCACAC-TCTG 110926 ||| ||||| | || |||||||||||| ||| ||| || |||||| ||| Sbjct 710603 GATGCGGTGGACGTTCAAACCAATACCACCAGCCATCTTGGAGATCATGGCACACGTCT- 710661 Query 110927 TGAGTGTACCATAAATACCATCAATCGAATCTGCCTTGTTGGCAATTAGAAAGCAAGAAG 110986 | || || | || ||||| ||||| || |||| || | | || ||||| || | Sbjct 710662 TCAGAGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCGACCAGGAAGCATGAGG 710721 Query 110987 ACATCTGAGGACGAGGCGTTCCCGCATTGAAGAGTGTAGGTGTCGCATGAATGAACAGAC 111046 ||| ||| | | || || || ||||||||||| || || | ||||| ||| ||| Sbjct 710722 ACAGCTGGGCTTGCGGGGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGA--AGAA 710779 Query 111047 CTTG--GGACATCTTGTTGTATGTGTCGAG 111074 |||| |||||| || |||||| ||||| Sbjct 710780 CTTGCTGGACATGAGGTGGTATGTCTCGAG 710809 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588975904291400