Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq7 257 2e-63 >seq7 Length=2761852 Score = 257 bits (284), Expect = 2e-63 Identities = 1143/1781 (64%), Gaps = 67/1781 (4%) Strand=Plus/Plus Query 105558 TGAACTGAATTGGGCGCGCCTTTGCCTTAGAT-CGGAGATAGTACATCCCGGTCTTGAGT 105616 ||||||| || || |||| || | | | | | ||||| |||||||| ||||||||||| Sbjct 709114 TGAACTGGATAGG-CGCGGCTGCGGCCTGGGTACGGAGGTAGTACATGCCGGTCTTGAGA 709172 Query 105617 CCTTGTTTCCACGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATG 105676 || | ||||| || | ||||| | || |||| |||||| || | |||| Sbjct 709173 CCGAGCTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCATCGTGGGGTCCTTCATG 709232 Query 105677 AAAAGATTCAT--ACTTTGACTCTGGTCAATGAAGCGACCACGTTGTGCCGCCATATCAA 105734 | || | ||| |||| |||| ||||| |||||| | |||||||| | | Sbjct 709233 TGGATGTTGAGGGACTGGGACT--GGTCGATGAAAGCACCACGATCGGCCGCCATCTGGA 709290 Query 105735 TGACATCCTTCATCTTGATTTCCCACACTGTGCGGTAGAGATTCTTGATATCATCTGGGA 105794 || | | ||| ||||| || || ||| ||| |||||| || || |||| Sbjct 709291 CGATTTGACGCTGAGAGATCTCCCAGACGGTCTTGTACAGAGCCTTGATGTCCTCGGGGA 709350 Query 105795 TATCTGAGATATTTTGAATTGAACC---CCCCGCCTTGACCATGAGATCCTTCATATCCT 105851 | | | ||| || || || || || | | || ||| || | | |||||| | | Sbjct 709351 TGTTGGGGATGTTCTGGATGGAGCCGTTCTCGGCAATGA---TGCGGTTCTTCATGGCGT 709407 Query 105852 TGGACCAAAGACCAATCTTCTTGAGATCATTGACGAGATGCTTGTTGACAATCACAAACT 105911 |||||| || || | | || || |||| || |||||||| | |||| Sbjct 709408 CGGACCACAGGCCGGTGTCGACCAGGTCCTTGAGAAGCCAGGGGTTGACAACCTGGAACT 709467 Query 105912 CTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGGTTCAAAGCATTCATTAT 105971 | || || ||| | || | | |||||||| | |||||||| || |||||||| || | Sbjct 709468 CACCAGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCATTCGTTGT 709527 Query 105972 TACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAA 106031 | |||| ||| || | ||| ||| || ||||| || || | | | ||||| || | Sbjct 709528 TGCCCAGGATCTGAGAAGTGCTGGCAGTGGGCATGGGAGCGACGAGCAAGCTGTTGCGGA 709587 Query 106032 GACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA---GTTG-AGCTTGGTT 106087 ||| | |||||||| | |||||||| ||||| || | || | || || | Sbjct 709588 CACCGTGCTCCTTGATCTGCTCCTTGAGGGAGTCCCACTCCCACAGGTCGGAG---GGCT 709644 Query 106088 TCACCTTCCCACATATCAAATTGAAGCACCCCTTGGGACGTGGGAGAACCCTCAAATGTC 106147 | || | ||||||| ||| | || || | || | || | ||| || |||| || | Sbjct 709645 TGACGT-CCCACATGTCATACTGCAGGATGCCCTCAGATGCGGGTGATCCCTTGAACGAT 709703 Query 106148 TCATA-GGAACCTTGGGCTTCAGCCAATTCACA-GCTCGCCTCCAGGGATGCGTGATACA 106205 || || || ||| ||| | |||| || | ||||| |||| || || || | Sbjct 709704 TCGTACGGGCCCTCAATCTT--GGCAATCTCCATGGAAGCCTCAAGGGCGGCATGGTAAA 709761 Query 106206 TGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGC 106265 |||| || ||||| | |||| ||| || ||| || ||||| | | || || Sbjct 709762 TGGTCTCGAAGATCTGCTTGTTCAGCTCGCGAGCCTCAGGAGACTCAAAGG-GCAGACGC 709820 Query 106266 ACAAA-ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATA 106324 | | | || | || || ||||| |||||||| | ||||||||||| ||| ||||| Sbjct 709821 AGAGCGAGGAACGCGTCAGCAAGACCCTGAACACCGACACCAATAGGTCGGTGGCGCATG 709880 Query 106325 TTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTT 106384 || || || || || || || ||| || ||||||| ||||| || || Sbjct 709881 TTGCTGTTGCGGGCCTCCTGGACAGGGTAATGGTTCACATCAATGATGCGGTTGAGGTTA 709940 Query 106385 TTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCA 106444 | || | ||| |||| ||| ||||| || | | || | | || |||| Sbjct 709941 CGGACGACCACCTTGGTGACTTCGTGAAGCTTCTTGAAGTCGTA-----GCATC-CTTCG 709994 Query 106445 TTG------ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCC 106498 ||| || | || ||||| | || ||||| ||||| ||||| |||||| Sbjct 709995 TTGTAGTCGACGAAGGCGGGGAGGGCCAGAGAGGCCAAGTTGCAGACAGCAACCTCATCG 710054 Query 106499 TTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTC 106558 | |||||| | || || || || | ||| || || || || |||| ||| Sbjct 710055 GGGGCACAGTACTCGATGATCTCAGTGCAGAGGTTAGAGCTGCGGATAGTTCCCAGGTTC 710114 Query 106559 TTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCC 106618 || ||||| ||||| |||||| |||||||||||||||| |||| | || ||||| Sbjct 710115 TTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCG 710174 Query 106619 GTCTGTGACTTGAGAATTGCCTTCCACA-CATCGGCGGCTGGTACAATGGCGTTG--GCC 106675 ||||| | || || || | | ||||| | || | | || |||| ||| ||| Sbjct 710175 GTCTGAGCCTCCAGGATGGAGTACCACAGCTTCTGAGCGCGG----ATGGTCTTGCGGCC 710230 Query 106676 -CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGA 106734 |||||||| |||||||||| ||| || || ||||||||||| || ||| | Sbjct 710231 ACGTCCCTCGCTCTCGTACTTTTCGTACAGAGCCTCAAACTCCTCGCCGTAGCAGTCAGC 710290 Query 106735 GAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCACCCTC--CTCAACCCG 106791 || || || || || || || || | || | ||| | ||| || ||| || || Sbjct 710291 AAGGCCAGG-GCATTCGTTGGGGCACATGAGCGTCCAGT--CCAGGTTCTTCTCGACACG 710347 Query 106792 CTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTC 106851 ||||||||| || || ||||||||||||| || || || | | ||| |||| || Sbjct 710348 CTTCATGAAGAGATCGGGAATCCACAGGGCAAGGAACAGGTCGCGAGCGCGAACCTCCTC 710407 Query 106852 GTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAG 106911 | ||| ||||| || | |||||||| || | || || |||||||| ||||| || Sbjct 710408 CTTACCGTGGTTCTTGCGGAGATCAAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAG 710467 Query 106912 ATAGACTGCGATAGATCC------CTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTG 106964 |||| || | | || ||| | | ||||| | | || | || || || | Sbjct 710468 GTAGATGGCAAAGGCACCAGGACGCTTGTTGCCGCCCTGGTCGA----CGTATCGAGCAG 710523 Query 106965 TGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAA 107024 || ||| || || || ||||| || ||||| || | || || || || || || Sbjct 710524 TGTTGTTGAAGACTCGCAGCATGGGGATAATGCCGTTGGAGGTGCCGTTGGTGCCGGCAA 710583 Query 107025 TACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTG 107084 | || |||| | | |||| || || |||||||| |||||| ||| | Sbjct 710584 TGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTCAAACCAATACCACCAGCCATCTTGG 710643 Query 107085 AGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGG 107144 |||| |||||| | | ||||| | |||||||| | || ||| ||||| || Sbjct 710644 AGATCATGGCACACGTCTTCAGAGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGT 710703 Query 107145 CGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTG 107204 ||| |||||||| ||||| ||| | | || |||||||||||||||||||| || | Sbjct 710704 CGACCAGGAAGCATGAGGACAGCTGGGCTTGCGGGGTACCAGCATTGAAGAGGGTGGGGG 710763 Query 107205 TTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAAT 107262 || || ||| | | |||| |||||| || ||||||||| | ||| ||||| Sbjct 710764 AGGCATGGGTGA--AGAACTTGCTGGACATGAGGTGGTATGTCTCGAGAACACGCTCAAT 710821 Query 107263 GTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGT 107303 ||| || || |||||| | |||||| ||||| | ||||| Sbjct 710822 GTCGTCTCCCCAGATGCCAACGGCCACTCGCATGATCATGT 710862 Score = 107 bits (118), Expect = 2e-18 Identities = 150/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 117273 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCC 117332 |||||| ||| ||| |||||||| || || || || || || || || ||| ||||| Sbjct 1551372 GGCAAAGTCCGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTGGAAAAGGTCAGGCC 1551313 Query 117333 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 117392 |||||||||||||||||||| | ||| | || | | || | ||| ||||||||| Sbjct 1551312 GGGCATGAGACCCCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 1551253 Query 117393 ACCCTCCACACACGCAAACGCAAAAAGGCGCTCGGCGAAGGAGCGAGACTTTGT-GTCAA 117451 |||||| || ||||| |||| ||||||| ||| |||||| ||| |||| | | Sbjct 1551252 ACCCTCGACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAG-GAGTTCTTGTCCTGGA 1551194 Query 117452 ACCATTTCATTGCCCATTTCGCCTTCTT 117479 |||| || ||||| | |||||||| Sbjct 1551193 TCCATCGGATAGCCCAGTCAGCCTTCTT 1551166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980704128120