Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_018874.1 Length=211518 Score E Sequences producing significant alignments: (Bits) Value seq8 87.8 2e-12 >seq8 Length=1441345 Score = 87.8 bits (96), Expect = 2e-12 Identities = 105/143 (73%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 197435 CTCCGTTCATGTACAACACGTCAAAAGCAAAGACGCACACCTGGACGGTTATCTCTTCTT 197494 ||||||| | |||| || |||||| ||||||||||| |||| ||| | || || || Sbjct 747033 CTCCGTTGAAATACAGCAGGTCAAATGCAAAGACGCAGACCTTGACCTTGATGTCCTCAG 747092 Query 197495 CCTTGACATCTTTACGTTTTCTGGTCGCCAGCTTTTGAAAGGGAAGGATCTGCTTCTTCT 197554 ||||||| ||||| | || | ||| |||| || || || |||| || ||||| | Sbjct 747093 CCTTGACGTCTTTCCTCTTGCGAGTCATGAGCTGCTGGAAAGGCAGGACCTTCTTCTCCG 747152 Query 197555 CAACGTCCCAAGCAACTGCCTCA 197577 |||||||||| || || | |||| Sbjct 747153 CAACGTCCCAGGCCACGGTCTCA 747175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 676729490031440