Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq7 446 3e-120 >seq7 Length=2761852 Score = 446 bits (494), Expect = 3e-120 Identities = 1255/1889 (66%), Gaps = 102/1889 (5%) Strand=Plus/Plus Query 212553 ACCGTAAACTGTACTGGATCAGCAGCAGCCTTGGTGCGTAGATAGTACATGCCGGTCTTT 212612 || || ||||| | || | || || |||| ||| || || ||||||||||||||||| Sbjct 709110 ACGGTGAACTGGATAGGCGCGGCTGCGGCCTGGGTACGGAGGTAGTACATGCCGGTCTTG 709169 Query 212613 AGGCC---CTTGCCCCAGCCGTGCATGTGCATTGCTG-TGAGTTTCTTCAGCTTAATATT 212668 || || ||| ||||||| | |||||| |||| ||| |||| | || | Sbjct 709170 AGACCGAGCTT---CCAGCCGGTGAAGTGCAT-GCTGGTGA---TCTTGCCC---ATCGT 709219 Query 212669 CTGGTCATCCTCGTGGCCCAGATGTAGGTTCAGGGACTGACTCTGGTCTATGAATGGGGC 212728 |||| | | |||| | ||| |||||||| |||||| ||||| | | Sbjct 709220 GGGGTCCTTCATGTGG---------ATGTTGAGGGACTGGGACTGGTCGATGAAAGCACC 709270 Query 212729 CCTGTCAGCGGCCATGTCTATGATATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGAT 212788 | || || ||||| | | ||| | | ||| |||| |||||| ||||||||| | | Sbjct 709271 ACGATCGGCCGCCATCTGGACGATTTGACGCTGAGAGATCTCCCAGACGGTCTTGTACAG 709330 Query 212789 TTCTTTGAGGTCCTCTGGGAAGCCGGGGATGTTCTGCACAGACCCCCTGTGTATGGTCA- 212847 | |||| |||||| |||| | |||||||||||| | || || || | | | || Sbjct 709331 AGCCTTGATGTCCTCGGGGATGTTGGGGATGTTCTGGATGGAGCC---GT-TCTCGGCAA 709386 Query 212848 -GCTGCAGGCG--CATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGT 212904 | ||| | |||| | ||| ||| ||||| || ||||| ||||| || Sbjct 709387 TGATGCGGTTCTTCATGGCGTCGGACCACAGGCCGGTGTCGACCAGGTCCTTGAGAAGCC 709446 Query 212905 GAGGGTTGACTATCTGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAAAGTTTGAAGTGT 212964 |||||||| | |||||| ||||| | || || | | |||||| | ||| ||||||| Sbjct 709447 AGGGGTTGACAACCTGGAACTCACCAGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGT 709506 Query 212965 AGGGCTCGATGCTCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAG 213024 ||||||||| || |||||||| ||||| ||||| | ||||||||| ||||||||||||| Sbjct 709507 AGGGCTCGAAGCATTCGTTGTTGCCCAGGATCTGAGAAGTGCTGGCAGTGGGCATGGGAG 709566 Query 213025 CCACCAGGAGACTGTTCCTCACTCCGTGCTCGCCGATGAGGCGCC--GAAGCTCTGCCCA 213082 | || || | ||||| | || |||||||| ||| | | || || | | Sbjct 709567 CGACGAGCAAGCTGTTGCGGACACCGTGCTCCTTGATCTG-CTCCTTGAGGG-------A 709618 Query 213083 GTCCCATCTGCCAGACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCC 213142 |||||| || ||| |||||| | ||| |||| |||||||||| |||||| |||||| Sbjct 709619 GTCCCA-CTCCCA--CAGGTCGGAGGGCTTGACGTCCCACATGTCATACTGCAGGATGCC 709675 Query 213143 TTTGCTCACGGGGCTG--CCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCG 213200 | | | | || || |||| | | || ||| ||||| | |||||| | ||| Sbjct 709676 CT--CAGATGCGGGTGATCCCTTGAACGATTCGTACGGGCCCTCAATCTTGGCAATCTCC 709733 Query 213201 CAGGACGCCTGCAGGGCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTG 213260 ||| |||| ||||| || | ||| ||||| || || |||| | |||| |||| Sbjct 709734 ATGGAAGCCTCAAGGGCGGCATGGTAAATGGTCTCGAAGATCTGCTTGTTCAGCTCGCGA 709793 Query 213261 GCCTCTGGGGACGTGAAGGGCATCATCAT-GCGTTGGAACACATCAGCCAGCCCCTGGAC 213319 ||||| || ||| ||||||| || ||| ||||| | ||||| || ||||| || Sbjct 709794 GCCTCAGGAGACTCAAAGGGCAGACGCAGAGCGA-GGAACGCGTCAGCAAGACCCTGAAC 709852 Query 213320 CCCGATGCCGATGGGTCTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAGGGGTAAAA 213379 |||| || || |||| ||| | || ||| ||| | ||||| | |||||| Sbjct 709853 ACCGACACCAATAGGTCGGTGGCGCATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAATG 709912 Query 213380 GTTGCAGTCGATGATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTA 213439 ||| || ||||| ||||||||| ||| | |||| |||||||| | | || | Sbjct 709913 GTTCACATCAATGATGCGGTTGAGGTTACGGACGACCACCTTGGTGACTTCGTGAAGCTT 709972 Query 213440 CTCGTGATTGAACACGTAGCCCCCGTCCTGC------ACAAACTCAGGCAGGGCGATGCT 213493 || |||| |||||| || || | || || | || ||||| | Sbjct 709973 CT------TGAAGTCGTAGCATCCTTCGTTGTAGTCGACGAAGGCGGGGAGGGCCAGAGA 710026 Query 213494 GGCCAGGTTGCAAACGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAG 213553 ||||| |||||| || || ||||| | | | | |||||| |||||||| ||||| || Sbjct 710027 GGCCAAGTTGCAGACAGCAACCTCATCGGGGGCACAGTACTCGATGATCTCAGTGCAGAG 710086 Query 213554 GTTGCTGCATCGGATGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGA-ATCCT 213612 ||| || ||||| || |||||||||| ||||| ||| ||| | |||| ||||| Sbjct 710087 GTTAGAGCTGCGGATAGTTCCCAGGTTCTTCTGGTTGCTCTT-GCGGTTGCAGTGATCCT 710145 Query 213613 TGTAGAGCATGTAGGGGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCTCCAGAGGT 213672 ||||||||||| ||||| |||||||| ||| | | |||| || | ||| || | Sbjct 710146 TGTAGAGCATGAAGGGGTTACCGGTCTCGGTCTGAGCCTCCAGGATGGAGTACCACAGCT 710205 Query 213673 ACCTGGCCTTGACCACCCGCCTGACAGCTCCGGGCGTAGC-CTCGTACTGTTCGTAGAGC 213731 | || || | || | || || | | || |||||||| |||||| || Sbjct 710206 TCTGAGCGCGGATG----GTCTTGCGGCCACGTCCCTCGCTCTCGTACTTTTCGTACAGA 710261 Query 213732 TCGTTGAATTCGTGGCCCCAGACCCTGTCCAGTCCCGGACAGG--ATGCG---GGACACA 213786 | | || || | ||| || | ||| || | || |||| || || || |||| Sbjct 710262 GCCTCAAACTCCTCGCCGTAG---CAGTC-AG-CAAGGCCAGGGCATTCGTTGGGGCACA 710316 Query 213787 TGAGGCTCCAGTCCCCGT-CATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGC 213845 |||| |||||||| || | |||| ||| | || |||||| || || || | |||||| Sbjct 710317 TGAGCGTCCAGTCCAGGTTCTTCTC-GACACGCTTCATGAAGAGATCGGGAATCCACAGG 710375 Query 213846 GCGGTGAACAGGTCCCTGGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGA 213905 || ||||||||| | | | ||| ||| || ||| ||||| ||||| || Sbjct 710376 GCAAGGAACAGGTCGCGAGCGCGAACCTCCTCCTTACCGTGGTTCTTGCGGAGATCAAGG 710435 Query 213906 AAGTCAAAGATGTCCGCGTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTC 213962 |||||||||| ||| |||||||| ||||| | ||||||||||||||| || | || | Sbjct 710436 AAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTG 710495 Query 213963 TTGCCGCCCTGGTCCACCAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGC 214022 |||||||||||||| || | || ||||||||| ||||| | ||| | | Sbjct 710496 TTGCCGCCCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACTCGCAGCATGGGGATAATG 710555 Query 214023 CCGTTGGACTGTCCGTTGGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATG 214082 |||||||| |||||||| || || || || ||||||| ||| | || ||| || Sbjct 710556 CCGTTGGAGGTGCCGTTGGTGCCGGCAATGTAGGAGCCGGTGGCAC---GGATGC-GGTG 710611 Query 214083 GA----GAGCCCTATGCCACCGGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTC 214138 || | || || ||||| || ||||||||||||||| || | ||| ||| || Sbjct 710612 GACGTTCAAACCAATACCACCAGCCATCTTGGAGATCATGGCACACGTCTTCAGAGTGTC 710671 Query 214139 CATGATGCCGGCCATGCTGTCATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTGGGG 214198 ||| || | |||||||| || | | || | || |||||| || |||| ||| Sbjct 710672 GTAGATACCCTCAATGCTGTCGTCCTTCATGTCGACCAGGAAGCATGAGGACAGCT-GGG 710730 Query 214199 CCTG-GACGAGCCAGAGTTGAAAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGA 214257 | || | | |||| ||||| || |||||| ||||||| | | |||||| | || | Sbjct 710731 CTTGCGGGGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTGGACA 710790 Query 214258 GGAGCCTGTAGGTCTCCAGGACTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCAC- 214316 ||| ||| ||||| || || ||||||| ||| | || ||| Sbjct 710791 TGAGGTGGTATGTCTCGAGAACACGCTCAATGTCGTCTCCCCAGATGCCAACGGC-CACT 710849 Query 214317 CTCATCAGCATGTGCTGGGGCCTCT---CTATGGGTCCTTTGGGGCCCTTGAGCAGGTAG 214373 | ||| | ||||||||| |||| || | || || | | | |||||| ||||| Sbjct 710850 CGCATGATCATGTGCTGTGGCCGCTCGACAATCTTGCCGTCGAG---CTTGAGGAGGTAT 710906 Query 214374 GAGCGCTCCAGAGTCTTGAACCCAAAGTA 214402 || |||||||| |||||||| |||||||| Sbjct 710907 GATCGCTCCAGCGTCTTGAAGCCAAAGTA 710935 Score = 208 bits (230), Expect = 1e-48 Identities = 566/851 (67%), Gaps = 28/851 (3%) Strand=Plus/Minus Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898 ||||||||| | || | |||||||||||||| ||||| || ||| ||||||||||| Sbjct 1551663 CTGGTAGTCGGCGACGCGCTTCTCAAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTC 1551604 Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAG-GCCCATCTGTTCCAGCA 47957 ||| ||| |||||||||| | || |||||| | || ||| | |||||| Sbjct 1551603 CATAAAGTCAAAGGGGTTGGACGACTTGTACACCT-TCTCGTTGCCGAGAGCGACCAGCA 1551545 Query 47958 GGTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGG 48017 || | || || || | || ||||| | ||| ||| || ||||||||| | || | Sbjct 1551544 GGCGGTCGGCAACAAATTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCCAGCAGAG 1551485 Query 48018 ACACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCT 48077 |||| |||| || || ||||||| ||| || | ||||| || | || | Sbjct 1551484 CGCAAGGCAGGGCCTCGGTCAGGAACTCCTGCTCGATGCGGACGGCGTCGGTGATGATGT 1551425 Query 48078 -GCTTAACGCGGGACT-CTGAGG-GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGG 48134 || | | | | ||| | | || || |||||| || | |||| ||||| Sbjct 1551424 CGCGGATCACCTCCTTGCTGGCGCGGTTCTT---CAGGTG---GGAGTGCAGCAGGCAGG 1551371 Query 48135 CAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAG 48194 |||||||| |||||| || ||||| || ||||||| ||||||| ||| || || | Sbjct 1551370 CAAAGTCCGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTGGAAAAGGTCAGGCCGG 1551311 Query 48195 GCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGC 48254 |||||| |||| || ||||||||||| || | || || | || ||||||||| | Sbjct 1551310 GCATGAGACCCCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATAC 1551251 Query 48255 CCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCC 48314 |||| || || || || || || | || | || || | ||||||||| ||||| Sbjct 1551250 CCTCGACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAGGAGTTCTTGTCCTGGATCC 1551191 Query 48315 A--GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAA 48372 | ||| | |||||||| |||||||| |||||| || || ||||| || || ||| Sbjct 1551190 ATCGGATA--GCCCAGTCAGCCTTCTTGCGGATGCAAGGAATGGTCTCAATCGCGTTGAA 1551133 Query 48373 GAGCTTCTTGCACTCAC-CTGCGTCCGCAACATAGGT---AGTGAGCAGCTTTGCGTACA 48428 ||| | ||| || | ||| ||| | || || |||||||| | |||| Sbjct 1551132 GAGGTAGCTGCGCTGGCTGTGC-TCCTTGATGTAAGTGTCGATGAGCAGC---GAGTACG 1551077 Query 48429 TCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACA 48488 |||| ||||| | ||||| || ||||||||| ||||||||| | ||||| | Sbjct 1551076 TCTCGGAGTGTATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGAA 1551017 Query 48489 CCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAG 48548 ||| || || | ||| | ||| | ||| ||||| ||||| || || || || || | Sbjct 1551016 TCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATGCCGTCCGAGGCGG 1550957 Query 48549 CAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGC----ATTC 48604 | |||||||| |||| || | ||| | ||||| | | | || || ||| Sbjct 1550956 CGAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAG-GCGGTTGTTC 1550898 Query 48605 CAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGTGCT 48664 ||| | || | ||| ||| |||||| | || || ||||||||||||| || || Sbjct 1550897 CAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCAGTCCAGAAGGAAGCCTCGGCC 1550838 Query 48665 TTTTTGTACAT 48675 || |||||||| Sbjct 1550837 TTCTTGTACAT 1550827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532648625920