Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq7 273 4e-68
>seq7
Length=2761852
Score = 273 bits (302), Expect = 4e-68
Identities = 846/1280 (66%), Gaps = 57/1280 (4%)
Strand=Plus/Plus
Query 221420 AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTG-GCCTCGGGAGA 221478
||||| || ||||| |||||||| |||||| |||||| || ||| | ||||| |||||
Sbjct 709746 AGGGCGGCATGGTAAATGGTCTCGAAGATCTGCTTGTTCAG-CTCGCGAGCCTCAGGAGA 709804
Query 221479 AGTGAAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGAT 221538
||||||| |||||| | || |||| || || ||||| || |||| ||| ||
Sbjct 709805 CTCAAAGGGCAGACGCAGAGCGAGGAACGCGTCAGCAAGACCCTGAACACCGACACCAAT 709864
Query 221539 GGGCCTGTGTCTCCTGTTG--GAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596
|| | ||| | | ||||| | |||| | || |||| || || ||| ||| || ||
Sbjct 709865 AGGTCGGTGGCGCATGTTGCTGTTGCGGGC-CTCCTGG-ACAGGGTAATGGTTCACATCA 709922
Query 221597 ATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTG 221656
|| | ||||||||| | || || || || ||| ||||||| ||
Sbjct 709923 ATGATGCGGTTGAGGTTACGGACGACCACCTTGGTGACTTCGTGAAGCTTCT------TG 709976
Query 221657 AACACCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCC 221716
|| | | || || |||| | | || || || ||| ||||| | ||||
Sbjct 709977 AAGTCGTA---GCATCCTTCGTTGTAG---TCGACGAAGGCGGGGAGGGCCAGAGAGGCC 710030
Query 221717 AGGTTACACACGGCCACCTCGTCCTTGTTGGTA---TACTGTATGATCTCTGTACAGAGG 221773
| ||| || || || ||||| || | || | |||| |||||||| || ||||||
Sbjct 710031 AAGTTGCAGACAGCAACCTCATC---GGGGGCACAGTACTCGATGATCTCAGTGCAGAGG 710087
Query 221774 TT---GCTGCACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCG-TC 221829
|| ||||| ||| || ||||||| || || || |||||| ||| ||| | ||
Sbjct 710088 TTAGAGCTGCG---GATAGTTCCCAGGTTCTTCTGGTTGCTCTTGCGGTTG-CAGTGATC 710143
Query 221830 CTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAG 221889
|||||||||||| ||||| || ||||| ||||||| |||| || || ||| ||
Sbjct 710144 CTTGTAGAGCATGAAGGGGTTACCGGTCTCGGTCTGAGCCTCCAGGATGGAGTACCACAG 710203
Query 221890 TTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCCTCGGTCTTTTCATACCCGGTATAGA 221948
| |||| |||| | ||| | | | |||||| ||| | | || || |||
Sbjct 710204 CT-TCTGAGCGCGGATGGTCTTGCGGCCACGTCCCTCGCTCTCGTACTTTTCG-TACAGA 710261
Query 221949 GCATGTCAAACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCA 222008
|| | |||||| || ||||| || | ||||| || || | ||| ||||| |
Sbjct 710262 GCCT--CAAACTCCTCGCCGTAGCAGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATGA 710319
Query 222009 GACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCT 222068
| |||||| | ||| | | ||| | || ||||||||| || || |||||||| ||
Sbjct 710320 GCGTCCAGTCCAGGTTCTTCTCGACACGCTTCATGAAGAGATCGGGAATCCACAGGGCAA 710379
Query 222069 GAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACT 222128
| || || || | | || ||||||| |||| ||| || | ||||| | || |
Sbjct 710380 GGAACAGGTCGCGAGCGCGAACCTCCTCCTTACCGTGGTTCTTGCGGAGATCAAGGAAGT 710439
Query 222129 CAAAAATGTCAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGC 222188
|||| | ||| |||||||| ||||| || |||| ||| | || || || ||||||||||
Sbjct 710440 CAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTGC 710499
Query 222189 CACCCTGATCCAC-CATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCC 222246
| ||||| || || ||| ||| | |||||||| || || | || | | ||
Sbjct 710500 CGCCCTGGTCGACGTATC--GAGCAGTGTTGTTGAAGACTCGCAGCATGGGGATAATGCC 710557
Query 222247 GTTGGATCGACCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTTAC--TGG-C 222303
|||||| ||||||||||| |||||| | ||| ||| | || | | ||| |
Sbjct 710558 GTTGGAGGTGCCGTTGGTGCCGGCAATGTAGGAGCCGGTGGCAC---GGATGCGGTGGAC 710614
Query 222304 AGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCAT 222363
|| || |||||||| || || ||||||||||| || |||| ||||||||
Sbjct 710615 GTTCAAACCAATACCACCAGCCATCTTGGAGATCATGGCACACGTCTTCAGAGTGTCGTA 710674
Query 222364 GATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAAACAAGACGACATCTGAGATTT 222423
||| ||||| || ||| ||||| | || | ||| || || || |||| ||| | ||
Sbjct 710675 GATACCCTCAATGCTGTCGTCCTTCATGTCGACCAGGAAGCATGAGGACAGCTGGGCTTG 710734
Query 222424 GGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAG 222483
| || || || || || || ||||| ||| || || ||| | || ||||| ||
Sbjct 710735 CGGGGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAGAACTTGCTGGACATGAG 710794
Query 222484 ATCGTACGTCTCTACGACTCTGGCGATGTTGTC-CCCGTGAATCTGC--ATGGCGCATCT 222540
| ||| ||||| | || | | |||| ||| ||| || ||| | ||| ||
Sbjct 710795 GTGGTATGTCTCGAGAACACGCTCAATGTCGTCTCCCCAGA---TGCCAACGGCCACTCG 710851
Query 222541 CATGTACATGTACTGGGGCCTCTCCACA--GGACCCTTGGAGCTGGAGAGCAGGTACGAT 222598
|||| ||||| ||| |||| ||| ||| || | ||||| ||| ||||| |||
Sbjct 710852 CATGATCATGTGCTGTGGCCGCTCGACAATCTTGCCGTCGAGCT--TGAGGAGGTATGAT 710909
Query 222599 TTTTCCAGAGTCTTGAACCCAAAGTAGTTGAGGTCAAAGTCTCTGCCGTGAACCACGGCG 222658
||||| |||||||| |||||||| | | || ||||||| | ||| || | ||||
Sbjct 710910 CGCTCCAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTCTCGGTCGTAGACGATGGCG 710969
Query 222659 GCGTCCAGCTCCGACTTGTG 222678
| ||| |||||| ||||||
Sbjct 710970 GAGTCGAGCTCCTCCTTGTG 710989
Score = 235 bits (260), Expect = 1e-56
Identities = 566/856 (66%), Gaps = 22/856 (3%)
Strand=Plus/Plus
Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536
|| ||| | |||||||||||||| | || |||||| ||||| |||||||| |||
Sbjct 1550818 ATCTGGCAAATGTACAAGAAGGCCGAGGCTTCCTTCTGGACTGCCGAGGAGATTGACCTG 1550877
Query 25537 GCCAAGGACATGGACGGCTGGTAC----GCTCTATCCAAAGACGAGCAGCATTTTCTCAA 25592
|||||||| || ||| |||| || || || | | |||||| || | || ||
Sbjct 1550878 TCCAAGGACCTGCACGACTGGAACAACCGC-CTGAACGATGACGAGAAGTACTTCATCTC 1550936
Query 25593 GTACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAG 25652
|| | |||| ||||| || ||||| || || || || |||||||| ||| |||| |
Sbjct 1550937 TCACATCCTGGCCTTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTGGTCGAGCG 1550996
Query 25653 ATTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712
|||| | | || || ||| ||||| || |||||||| |||||||| ||
Sbjct 1550997 CTTCAGCGGCGAGGTCCAGATTCCCGAGGCTCGCTGCTTCTACGGCTTCCAGATCATGAT 1551056
Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATG---ACGTACATTACAGACGT 25769
|| || | ||||| ||| ||| | ||| || || || ||||| | ||
Sbjct 1551057 GGAGAACATACACTCCGAGACGTACTC---GCTGCTCATCGACACTTACATCAAGGAGCA 1551113
Query 25770 CGCCGAGAG-AGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGG 25828
| | || | || | || || || || ||| ||| || ||||| | |||||
Sbjct 1551114 CAGCCAGCGCAGCTAC-CTCTTCAACGCGATTGAGACCATTCCTTGCATCCGCAAGAAGG 1551172
Query 25829 CGCGGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAG 25888
| ||||| || |||||| | | ||| | | | |||| | |||| ||||| |
Sbjct 1551173 CTGACTGGGCTATCCGATGGATCCAGGACAAGAACTCCTCCTTTGCCCAGCGCCTGGTTG 1551232
Query 25889 CCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCA 25948
||||||| || || ||||| ||||| ||||||||| | ||||| |||||||||||||||
Sbjct 1551233 CCTTTGCCGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTTCTGGCTCA 1551292
Query 25949 AGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGG 26008
|| || ||| ||||||||| ||| ||||||||||||||||||| | |||||||
Sbjct 1551293 AGAAGCGGGGTCTCATGCCCGGCCTGACCTTTTCCAACGAGCTCATCTCGCGTGACGAGG 1551352
Query 26009 GTCTCCACAGAGATTTTGCCTGCCTGCTCTACACGGGCCACTTGCTCCACAAACCTTC-- 26066
|||| |||| || |||||||||||||| || | |||| || | || | |
Sbjct 1551353 GTCTGCACACGGACTTTGCCTGCCTGCTGCACTC---CCAC---CTGAAGAACCGCGCCA 1551406
Query 26067 TCAA-GAGACCGTCTACAGTATCATCAAAGAGGCTGTGGAGATCGAGAAGGAGTTTCNNN 26125
||| ||| || | ||||||| || || || |||||| ||||||| |
Sbjct 1551407 GCAAGGAGGTGATCCGCGACATCATCACCGACGCCGTCCGCATCGAGCAGGAGTTCCTGA 1551466
Query 26126 NNNNNNNNNNNNNNNNNNNNNNNNTGGGCATGAACAACAGACTCATGAGCCAATACATTG 26185
||||||||||| || || |||| || |||||||
Sbjct 1551467 CCGAGGCCCTGCCTTGCGCTCTGCTGGGCATGAACTCCAACCTGATGAAGCAGTACATTG 1551526
Query 26186 AGTATGTGGCCGACCATCTGCTGTGCCAGCTGGGACTCGCCAGACTCTACAGTACGCCTA 26245
| | ||| ||||||| |||||| | || || || | | |||| || | |
Sbjct 1551527 AATTTGTTGCCGACCGCCTGCTGGTCGCTCTCGGCAACGAGAAGGTGTACAAGTCGTCCA 1551586
Query 26246 ACCCGTTCGACTTTATGGAAAACATATCGTTGGAAGGGAAGACCAACTTCTTTGAAAAGA 26305
|||| || ||||||||||| ||||| || ||| || ||||||||||||||||| |||
Sbjct 1551587 ACCCCTTTGACTTTATGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTTGAGAAGC 1551646
Query 26306 GGGTCGGCGACTATCA 26321
| |||| |||||| ||
Sbjct 1551647 GCGTCGCCGACTACCA 1551662
Score = 109 bits (120), Expect = 1e-18
Identities = 105/135 (78%), Gaps = 0/135 (0%)
Strand=Plus/Plus
Query 221116 GTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACAGGTTAGAAGTGAACGG 221175
||| || || ||||| || || | || || | | |||||| | ||| |||||| | ||
Sbjct 709451 GTTGACAACCTGGAACTCACCAGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGG 709510
Query 221176 TTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGGTGGGCATGGGTGCCAC 221235
|||| || |||||||||||||||||||||| |||||||| ||||||||||| || ||
Sbjct 709511 CTCGAAGCATTCGTTGTTGCCCAGGATCTGAGAAGTGCTGGCAGTGGGCATGGGAGCGAC 709570
Query 221236 CAGCAGACTGTTGCG 221250
|||| ||||||||
Sbjct 709571 GAGCAAGCTGTTGCG 709585
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928844649062720
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