Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq7 248 1e-60 >seq7 Length=2761852 Score = 248 bits (274), Expect = 1e-60 Identities = 1149/1797 (64%), Gaps = 71/1797 (4%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| ||||| ||||||| || || | |||||| || || |||||||| ||| Sbjct 710869 CCACAGCACATGATCATGCGAGTGGCCGTTGGCATCTGGGGAGACGACATTGAGCGTGTT 710810 Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329 | ||||||||| || |||||| |||| | | ||| || || | || ||||||| Sbjct 710809 CTCGAGACATACCACCTCATGTCCAGCAAGTTCT--TCACCCATGCCTCCCCCACCCTCT 710752 Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389 ||||||||||||| || | | ||| ||||| |||||||| ||| || ||||| | Sbjct 710751 TCAATGCTGGTACCCCGCAAGCCCAGCTGTCCTCATGCTTCCTGGTCGACATGAAGGACG 710692 Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449 || || | |||||||| | ||||| | | |||||| ||||| ||| ||||| Sbjct 710691 ACAGCATTGAGGGTATCTACGACACTCTGAAGACGTGTGCCATGATCTCCAAGATGGCTG 710632 Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509 | |||||||| || || |||| | | |||| || ||| || || | Sbjct 710631 GTGGTATTGGTTTGAACGTCCACCGCATCCGTGCCACCGGCTCCTACATTGCCGGCACCA 710572 Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569 | || || | || ||||| || ||||| || || || ||| ||| || || || | Sbjct 710571 ACGGCACCTCCAACGGCATTATCCCCATGCTGCGAGTCTTCAACAACACTGCTCGATACG 710512 Query 75570 TAAATCAAGCGGGGCGTC-GCAAG------GGGTCCATCGCGGTCTACTTGGAACCATGG 75622 || | | ||||| | |||| || || | || ||||| | || || ||| Sbjct 710511 ----TCGACCAGGGCGGCAACAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCCTGG 710456 Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 || ||||| || | || |||||||| | || ||||| ||| | || |||| ||| Sbjct 710455 CACGCCGACGTCTTTGACTTCCTTGATCTCCGCAAGAACCACGGTAAGGAGGAGGTTCGC 710396 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG--G 75740 | | || || || ||||||||||||| || || ||||||||||| || ||| | Sbjct 710395 GCTCGCGACCTGTTCCTTGCCCTGTGGATTCCCGATCTCTTCATGAAGCGTGTCGAGAAG 710336 Query 75741 AGGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTG 75799 | ||| | ||| | || | || || || || || || || || | ||| Sbjct 710335 AACCTGG--ACTGGACGCTCATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACTGCTAC 710279 Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAG-GAGGGTAGAGCCAATGCGAC 75858 || ||||||||||| || || ||| |||||| | |||| ||||| | | || | Sbjct 710278 GGCGAGGAGTTTGAGGCTCTGTACGAAAAGTACG-AGAGCGAGGGACGTG-----GCCGC 710225 Query 75859 TGTACCAGCCG----CCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913 |||| ||| | || | | ||| | | || || | | ||||| ||||| || Sbjct 710224 AAGACCATCCGCGCTCAGAAGCTGTGGTACTCCATCCTGGAGGCTCAGACCGAGACCGGT 710165 Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973 | || | ||||| ||||||||| || ||| ||||| ||||| ||||| ||||| Sbjct 710164 AACCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGA 710105 Query 75974 ACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG 76033 || ||| ||||| || || ||||| || || | |||||| | |||||| Sbjct 710104 ACTATCCGCAGCTCTAACCTCTGCACTGAGATCATCGAGTACTGTGCCCCCGATGAGGTT 710045 Query 76034 GCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT------CAATGAAGAGACT 76087 ||||| ||||| ||||| || | ||||| || | || ||| |||| || Sbjct 710044 GCTGTCTGCAACTTGGCCTCTCTGGCCCTCCCCGCCTTCGTCGACTACAACGAAG-GATG 709986 Query 76088 CGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAAC 76147 | | || | | || ||||| ||| |||| ||| | || | || || ||| Sbjct 709985 C-----TACGACTTCAAGAAGCTTCACGAAGTCACCAAGGTGGTCGTCCGTAACCTCAAC 709931 Query 76148 CGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACAC 76207 || ||||||| || ||| || || || || || || || ||||| ||| Sbjct 709930 CGCATCATTGATGTGAACCATTACCCTGTCCAGGAGGCCCGCAACAGCAACATGCGCCAC 709871 Query 76208 AGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGC 76266 ||||||||||| | |||||||| ||||| || || | || | | ||| || | | Sbjct 709870 CGACCTATTGGTGTCGGTGTTCAGGGTCTTGCTGACGCGTTCCTCGCTCTGCGTCTGC-C 709812 Query 76267 ATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGC 76326 ||||| || ||| || ||| |||| | ||||| || ||||| || || || Sbjct 709811 CTTTGAGTCTCCTGAGGCTCGCGAGCTGAACAAGCAGATCTTCGAGACCATTTACCATGC 709752 Query 76327 ATCCCTGGAGGC-GAGTTGTGAATTGGCTGAAGCCCAAGGTTCC-TATGAGACATTTGAG 76384 |||| ||||| || |||| | ||| ||| || || || | || || Sbjct 709751 CGCCCTTGAGGCTTCCATGGAGATTGCC--AAGATTGAGGGCCCGTACGAATCGTTCAAG 709694 Query 76385 GGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT- 76443 || || ||||| || | || | || |||| ||| ||||||| | || || || || Sbjct 709693 GGATCACCCGCATCTGAGGGCATCCTGCAGTATGACATGTGGG-ACGTCAAGCC---CTC 709638 Query 76444 CAAC---TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 76500 | || | || ||||| |||||||| | ||||||||| | ||| | || ||||| Sbjct 709637 CGACCTGTGGGAGTGGGACTCCCTCAAGGAGCAGATCAAGGAGCACGGTGTCCGCAACAG 709578 Query 76501 TCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 76560 | | | || || ||||| || ||| ||| | || ||| |||| || || ||||| Sbjct 709577 CTTGCTCGTCGCTCCCATGCCCACTGCCAGCACTTCTCAGATCCTGGGCAACAACGAATG 709518 Query 76561 CTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCAT 76620 ||| || || ||||| | |||||||||| | || | ||| || |||||||| | Sbjct 709517 CTTCGAGCCCTACACTTCCAACATCTACCAGCGACGTGTCCTTGCTGGTGAGTTCCAGGT 709458 Query 76621 TGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAA 76680 ||||||| || |||| ||||| | | || || |||||| | | ||||| Sbjct 709457 TGTCAACCCCTGGCTTCTCAAGGACCTGGTCGACACCGGCCTGTGGTCCGACGCCATGAA 709398 Query 76681 GGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATAT 76740 | | | ||| | | | || ||||| || || ||| | | ||||| || || || Sbjct 709397 GAACCGCATCATTGCCGAGAACGGCTCCATCCAGAACATCCCCAACATCCCCGAGGACAT 709338 Query 76741 CAAGAATCTCTACCGCACAGTGTGGGAAA----TCAAGATGAAAGATGTCATTGACATGG 76796 |||| ||| ||| || || ||||| | ||| | ||| || | | |||| Sbjct 709337 CAAGGCTCTGTACAAGACCGTCTGGGAGATCTCTCAGCGTCAAA----TCGTCCAGATGG 709282 Query 76797 CCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAG 76854 | || ||||||||| ||||| || | |||| ||| | || | |||| | Sbjct 709281 CGGCCGATCGTGGTGCTTTCATCGACC--AGTCCCAGTCCCTCAACATCCACATGAAGGA 709224 Query 76855 TCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAAC 76914 || |||||| |||| || | ||||| | || ||||| | || ||||| || Sbjct 709223 CCCCACGATGGGCAAGATCACCAGCATGCACTTCACCGGCTGGAAGCTCGGTCTCAAGAC 709164 Query 76915 CGGAATGTACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCAGCCTTGA 76971 ||| |||||||| ||||| | |||| |||| || || ||||||| | |||| Sbjct 709163 CGGCATGTACTACCTCCGTACCCAGGCCGCAGCCGCGCCTATCCAGTTCACCGTTGA 709107 Score = 107 bits (118), Expect = 2e-18 Identities = 150/208 (72%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081 |||||||| | ||||| || |||| | | |||| ||| |||||| ||| |||| Sbjct 1551166 AAGAAGGCTGACTGGGCTATCCGATGGATCCAGGACAAGAACTC-CTCCTTTGCCCAGCG 1551224 Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141 ||| |||| ||||| || ||||||||||||||| ||| | || | | || | Sbjct 1551225 CCTGGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTT 1551284 Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201 ||| | |||||||||||||||||||| ||||| ||| || || || || || || || Sbjct 1551285 CTGGCTCAAGAAGCGGGGTCTCATGCCCGGCCTGACCTTTTCCAACGAGCTCATCTCGCG 1551344 Query 65202 AGATGAGGGTCTCCACCAGGAGTTTGCC 65229 || |||||||| ||| ||| |||||| Sbjct 1551345 TGACGAGGGTCTGCACACGGACTTTGCC 1551372 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569503057440