Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq7 248 1e-60
>seq7
Length=2761852
Score = 248 bits (274), Expect = 1e-60
Identities = 1149/1797 (64%), Gaps = 71/1797 (4%)
Strand=Plus/Minus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|||||| ||||| ||||||| || || | |||||| || || |||||||| |||
Sbjct 710869 CCACAGCACATGATCATGCGAGTGGCCGTTGGCATCTGGGGAGACGACATTGAGCGTGTT 710810
Query 75272 TTGGAGACATACGACAAGATGTCC--CAAGGTATGTTCATTCACGCAACACCAACCCTCT 75329
| ||||||||| || |||||| |||| | | ||| || || | || |||||||
Sbjct 710809 CTCGAGACATACCACCTCATGTCCAGCAAGTTCT--TCACCCATGCCTCCCCCACCCTCT 710752
Query 75330 TCAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGG 75389
||||||||||||| || | | ||| ||||| |||||||| ||| || ||||| |
Sbjct 710751 TCAATGCTGGTACCCCGCAAGCCCAGCTGTCCTCATGCTTCCTGGTCGACATGAAGGACG 710692
Query 75390 ACTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTG 75449
|| || | |||||||| | ||||| | | |||||| ||||| ||| |||||
Sbjct 710691 ACAGCATTGAGGGTATCTACGACACTCTGAAGACGTGTGCCATGATCTCCAAGATGGCTG 710632
Query 75450 GGGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAA 75509
| |||||||| || || |||| | | |||| || ||| || || |
Sbjct 710631 GTGGTATTGGTTTGAACGTCCACCGCATCCGTGCCACCGGCTCCTACATTGCCGGCACCA 710572
Query 75510 ATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATG 75569
| || || | || ||||| || ||||| || || || ||| ||| || || || |
Sbjct 710571 ACGGCACCTCCAACGGCATTATCCCCATGCTGCGAGTCTTCAACAACACTGCTCGATACG 710512
Query 75570 TAAATCAAGCGGGGCGTC-GCAAG------GGGTCCATCGCGGTCTACTTGGAACCATGG 75622
|| | | ||||| | |||| || || | || ||||| | || || |||
Sbjct 710511 ----TCGACCAGGGCGGCAACAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCCTGG 710456
Query 75623 CATGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682
|| ||||| || | || |||||||| | || ||||| ||| | || |||| |||
Sbjct 710455 CACGCCGACGTCTTTGACTTCCTTGATCTCCGCAAGAACCACGGTAAGGAGGAGGTTCGC 710396
Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAG--G 75740
| | || || || ||||||||||||| || || ||||||||||| || ||| |
Sbjct 710395 GCTCGCGACCTGTTCCTTGCCCTGTGGATTCCCGATCTCTTCATGAAGCGTGTCGAGAAG 710336
Query 75741 AGGGTGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTG 75799
| ||| | ||| | || | || || || || || || || || | |||
Sbjct 710335 AACCTGG--ACTGGACGCTCATGTGCCCCAACGAATGC-CCTGGCCTTGCTGACTGCTAC 710279
Query 75800 GGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAG-GAGGGTAGAGCCAATGCGAC 75858
|| ||||||||||| || || ||| |||||| | |||| ||||| | | || |
Sbjct 710278 GGCGAGGAGTTTGAGGCTCTGTACGAAAAGTACG-AGAGCGAGGGACGTG-----GCCGC 710225
Query 75859 TGTACCAGCCG----CCGATG-TTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGA 75913
|||| ||| | || | | ||| | | || || | | ||||| ||||| ||
Sbjct 710224 AAGACCATCCGCGCTCAGAAGCTGTGGTACTCCATCCTGGAGGCTCAGACCGAGACCGGT 710165
Query 75914 ACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGA 75973
| || | ||||| ||||||||| || ||| ||||| ||||| ||||| |||||
Sbjct 710164 AACCCCTTCATGCTCTACAAGGATCACTGCAACCGCAAGAGCAACCAGAAGAACCTGGGA 710105
Query 75974 ACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACG 76033
|| ||| ||||| || || ||||| || || | |||||| | ||||||
Sbjct 710104 ACTATCCGCAGCTCTAACCTCTGCACTGAGATCATCGAGTACTGTGCCCCCGATGAGGTT 710045
Query 76034 GCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT------CAATGAAGAGACT 76087
||||| ||||| ||||| || | ||||| || | || ||| |||| ||
Sbjct 710044 GCTGTCTGCAACTTGGCCTCTCTGGCCCTCCCCGCCTTCGTCGACTACAACGAAG-GATG 709986
Query 76088 CGCACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAAC 76147
| | || | | || ||||| ||| |||| ||| | || | || || |||
Sbjct 709985 C-----TACGACTTCAAGAAGCTTCACGAAGTCACCAAGGTGGTCGTCCGTAACCTCAAC 709931
Query 76148 CGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACAC 76207
|| ||||||| || ||| || || || || || || || ||||| |||
Sbjct 709930 CGCATCATTGATGTGAACCATTACCCTGTCCAGGAGGCCCGCAACAGCAACATGCGCCAC 709871
Query 76208 AGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGC 76266
||||||||||| | |||||||| ||||| || || | || | | ||| || | |
Sbjct 709870 CGACCTATTGGTGTCGGTGTTCAGGGTCTTGCTGACGCGTTCCTCGCTCTGCGTCTGC-C 709812
Query 76267 ATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGC 76326
||||| || ||| || ||| |||| | ||||| || ||||| || || ||
Sbjct 709811 CTTTGAGTCTCCTGAGGCTCGCGAGCTGAACAAGCAGATCTTCGAGACCATTTACCATGC 709752
Query 76327 ATCCCTGGAGGC-GAGTTGTGAATTGGCTGAAGCCCAAGGTTCC-TATGAGACATTTGAG 76384
|||| ||||| || |||| | ||| ||| || || || | || ||
Sbjct 709751 CGCCCTTGAGGCTTCCATGGAGATTGCC--AAGATTGAGGGCCCGTACGAATCGTTCAAG 709694
Query 76385 GGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCT- 76443
|| || ||||| || | || | || |||| ||| ||||||| | || || || ||
Sbjct 709693 GGATCACCCGCATCTGAGGGCATCCTGCAGTATGACATGTGGG-ACGTCAAGCC---CTC 709638
Query 76444 CAAC---TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAG 76500
| || | || ||||| |||||||| | ||||||||| | ||| | || |||||
Sbjct 709637 CGACCTGTGGGAGTGGGACTCCCTCAAGGAGCAGATCAAGGAGCACGGTGTCCGCAACAG 709578
Query 76501 TCTTTTGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATG 76560
| | | || || ||||| || ||| ||| | || ||| |||| || || |||||
Sbjct 709577 CTTGCTCGTCGCTCCCATGCCCACTGCCAGCACTTCTCAGATCCTGGGCAACAACGAATG 709518
Query 76561 CTTTGAACCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCAT 76620
||| || || ||||| | |||||||||| | || | ||| || |||||||| |
Sbjct 709517 CTTCGAGCCCTACACTTCCAACATCTACCAGCGACGTGTCCTTGCTGGTGAGTTCCAGGT 709458
Query 76621 TGTCAACAAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAA 76680
||||||| || |||| ||||| | | || || |||||| | | |||||
Sbjct 709457 TGTCAACCCCTGGCTTCTCAAGGACCTGGTCGACACCGGCCTGTGGTCCGACGCCATGAA 709398
Query 76681 GGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATCTCAGATATCCCAGATGATAT 76740
| | | ||| | | | || ||||| || || ||| | | ||||| || || ||
Sbjct 709397 GAACCGCATCATTGCCGAGAACGGCTCCATCCAGAACATCCCCAACATCCCCGAGGACAT 709338
Query 76741 CAAGAATCTCTACCGCACAGTGTGGGAAA----TCAAGATGAAAGATGTCATTGACATGG 76796
|||| ||| ||| || || ||||| | ||| | ||| || | | ||||
Sbjct 709337 CAAGGCTCTGTACAAGACCGTCTGGGAGATCTCTCAGCGTCAAA----TCGTCCAGATGG 709282
Query 76797 CCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGT--ATGAATCTATTCATGGAAAG 76854
| || ||||||||| ||||| || | |||| ||| | || | |||| |
Sbjct 709281 CGGCCGATCGTGGTGCTTTCATCGACC--AGTCCCAGTCCCTCAACATCCACATGAAGGA 709224
Query 76855 TCCAACGATGTCCAAGCTCTCTTCTATGCATATGTACGCGTGGAAACAGGGGCTCAAAAC 76914
|| |||||| |||| || | ||||| | || ||||| | || ||||| ||
Sbjct 709223 CCCCACGATGGGCAAGATCACCAGCATGCACTTCACCGGCTGGAAGCTCGGTCTCAAGAC 709164
Query 76915 CGGAATGTACTATCTCCGATCAAAGGCGAAAGCCCGACCAATTCAGTTCAGCCTTGA 76971
||| |||||||| ||||| | |||| |||| || || ||||||| | ||||
Sbjct 709163 CGGCATGTACTACCTCCGTACCCAGGCCGCAGCCGCGCCTATCCAGTTCACCGTTGA 709107
Score = 107 bits (118), Expect = 2e-18
Identities = 150/208 (72%), Gaps = 2/208 (1%)
Strand=Plus/Plus
Query 65023 AAGAAGGCGAAATGGGCAATGAAATGGTTTGAC-ACAAAGTCTCGCTCCTTCGCCGAGCG 65081
|||||||| | ||||| || |||| | | |||| ||| |||||| ||| ||||
Sbjct 1551166 AAGAAGGCTGACTGGGCTATCCGATGGATCCAGGACAAGAACTC-CTCCTTTGCCCAGCG 1551224
Query 65082 CCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGCGCTATTTA 65141
||| |||| ||||| || ||||||||||||||| ||| | || | | || |
Sbjct 1551225 CCTGGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATCTT 1551284
Query 65142 TTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTATTTCCCG 65201
||| | |||||||||||||||||||| ||||| ||| || || || || || || ||
Sbjct 1551285 CTGGCTCAAGAAGCGGGGTCTCATGCCCGGCCTGACCTTTTCCAACGAGCTCATCTCGCG 1551344
Query 65202 AGATGAGGGTCTCCACCAGGAGTTTGCC 65229
|| |||||||| ||| ||| ||||||
Sbjct 1551345 TGACGAGGGTCTGCACACGGACTTTGCC 1551372
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596569503057440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |