Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq7 219 4e-52
seq2 95.1 1e-14
>seq7
Length=2761852
Score = 219 bits (242), Expect = 4e-52
Identities = 1069/1675 (64%), Gaps = 58/1675 (3%)
Strand=Plus/Plus
Query 138358 ATCTCCCACACGGTCTTGTATAGATCACGAATATGTCGCGGTATTGTTGCA-ATATTTTG 138416
|||||||| ||||||||||| ||| | || | | ||| ||||| || || ||
Sbjct 709308 ATCTCCCAGACGGTCTTGTACAGAGCCTTGATGTC-CTCGGGGATGTTGGGGATGTTCTG 709366
Query 138417 AATGCTCCCGTTGGCCGCAATGATGCGATTTCTCATGTCATCGTTGTACAGATTCAACTT 138476
||| ||||| | ||||||||||| || ||||| | ||| |||| |
Sbjct 709367 GATGGAGCCGTTCTCGGCAATGATGCGGTTCTTCATGGCGTCGGACCACAGGCCGGTGTC 709426
Query 138477 GATCAAGTCGTTTATCAGATATCTGTTTATGACCTGAAATTCACCGGCCAATACTCGACG 138536
|| || ||| || | || | ||| | ||||| || ||||| || | || || ||
Sbjct 709427 GACCAGGTCCTTGAGAAGCCAGGGGTTGACAACCTGGAACTCACCAGCAAGGACACGTCG 709486
Query 138537 AACGTAAATGTTGTTGGTGAAAGGCTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGT 138596
||| |||||| ||| | ||||| || |||||||||| ||||| ||||||| ||
Sbjct 709487 CTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCATTCGTTGTTGCCCAGGATCTGAGAAGT 709546
Query 138597 GGTCGCGGTCGGCATGTACGCCACCAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCG 138656
| | || || |||||| || || | | || || | |||||| |||||| |
Sbjct 709547 GCTGGCAGTGGGCATGGGAGCGACGAGCAAGCTGTTGCGGACACCGTGCTCCTTGATCTG 709606
Query 138657 TTCCTTGAGCGACGACCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTG 138716
|||||||| || ||| ||||||| ||| || || || |||||| || |||||
Sbjct 709607 CTCCTTGAGGGAGTCCCACTCCCACAGGTCGGAGGGCTTGACGTCCCACATGTCATACTG 709666
Query 138717 TAACATTCCCAAACTTGCGGGACTGCCTTCGTACGAATCGTATACACCAA-ACTCTTGCG 138775
| || ||| | |||||| || | | |||| ||||| || | ||||| |
Sbjct 709667 CAGGATGCCCTCAGATGCGGGTGATCCCTTGAACGATTCGTACGGGCCCTCAATCTTG-G 709725
Query 138776 CCAACTCGTTGCTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGA 138835
| | ||| || ||||| || || ||| |||||| || ||| ||||||| || |
Sbjct 709726 CAATCTCCATGGAAGCCTCAAGGGCGGCATGGTAAATGGTCTCGAAGATCTGCTTGTTCA 709785
Query 138836 GCAATCGGGCCTCGGCGCTCTCGTACGGCATGCGGAGCATCGTG-AACGCGTCGGCCAGC 138894
|| || ||||| | ||| | |||| || || | || | |||||||| || ||
Sbjct 709786 GCTCGCGAGCCTCAGGAGACTCAAAGGGCAGACGCAG-AGCGAGGAACGCGTCAGCAAGA 709844
Query 138895 CCTTGCACGCCCACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGG----CTTC 138950
|| || || || || || | ||| || ||||||| || ||| |||||| | |
Sbjct 709845 CCCTGAACACCGACACCAATAGGTCGGTGGCGCATGTT----GCTGTTGCGGGCCTCCTG 709900
Query 138951 GATAGGATAATAGTTTACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGT 139010
|| ||| |||| ||| ||||| ||||| ||| | || || ||||||||||| || |
Sbjct 709901 GACAGGGTAATGGTTCACATCAATGATGCGGTTGAGGTTACGGACGACCACCTTGGT-GA 709959
Query 139011 ATGCTTTAATCGT-TCAAAATCGTATGTGCCCCCGTTGTCGTCGACGACGTCGACAAATT 139069
| | | || | | | || ||||| || |||||| |||||||| | || |
Sbjct 709960 CTTCGTGAAGCTTCTTGAAGTCGTAGCATCCTTCGTTGTAGTCGACGAAGGCGGGGA--- 710016
Query 139070 TGTTGACACAAATCGAGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGA 139129
| || | ||||| | |||||| || || || || |||||| | | ||| ||||
Sbjct 710017 --GGGCCAGA----GAGGCCAAGTTGCAGACAGCAACCTCATCGGGGGCACAGTACTCGA 710070
Query 139130 CAATTTCGGCACACAAATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTC 139189
|| || | || | ||| | ||| || || | || | || ||||| || |
Sbjct 710071 TGATCTCAGTGCAGAGGTTAGAGCTGCGGATAGTTCCCAGGTTCTTCTGGTTGCTCTTGC 710130
Query 139190 GGTTACAAGCATCTTTGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAA 139249
|||| || ||| ||||| ||||| | || | || || || || | ||| | |
Sbjct 710131 GGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGGTCTGAGCCTCCAGGA 710190
Query 139250 TGAATTTGAACAAGTCCCTAGCTTGTAT----TTGACGCACGTAAAGTTCGTCGCGCTCG 139305
|| | | ||| | | ||| | || ||| || | | || | |||| ||||
Sbjct 710191 TGGAGTACCACAGCTTCTGAGCGCGGATGGTCTTG-CG---GCCACGTCCCTCGCTCTCG 710246
Query 139306 TACTTTTCGTAGAGTTCGTCGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTG 139365
||||||||||| || | || || || |||||| ||||| ||| | | || | |
Sbjct 710247 TACTTTTCGTACAGAGCCTCAAACTCCTCGCCGTAGCAGTCAGCAAGGCCAGGGCATTCG 710306
Query 139366 TCAGGACACATGAGCGACCATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGA 139425
| || |||||||||| ||| | |||| || ||| ||| ||||||| ||||| |||
Sbjct 710307 TTGGGGCACATGAGCGTCCAGTCCAGGTTCTTCTCGACACGCTTCATGAAGAGATCGGGA 710366
Query 139426 ATCCACAAAGCGAACAGCAAATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTC 139485
||||||| || | | || ||||| || || ||| ||| ||| || |
Sbjct 710367 ATCCACAGGGCAAGGAACAGGTCGCGAGCGCGAACCTCCTCCTTACCGTGGTT--CTTGC 710424
Query 139486 --ATGTTAAGGAAATCAAAAACGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGC 139543
| | |||||| ||||| ||||| |||||||| || || || |||||||| | || |
Sbjct 710425 GGAGATCAAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCAC 710484
Query 139544 CTTTCCG---TTTGCCACCTTGATCGACGTGTCGTACAGCATTATTGAATACGCGCAACA 139600
| || ||||| || || ||||||| ||| ||| || ||||| || |||| ||
Sbjct 710485 CAGGACGCTTGTTGCCGCCCTGGTCGACGTATCGAGCAGTGTTGTTGAAGACTCGCAGCA 710544
Query 139601 TCGGCTCCAGACCGCTCGCTGTTCCGTTGGTGCTACGG--ATG--GGA-CTGTTGCGAGC 139655
| || | ||| | | || |||||||||| ||| ||| ||| | | || ||
Sbjct 710545 TGGGGATAATGCCGTTGGAGGTGCCGTTGGTGC--CGGCAATGTAGGAGCCGGTG---GC 710599
Query 139656 TCGGACGTCATGTACATTGATGCCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATC 139715
|||| | || || || | || || || || | | ||||| || | ||| |
Sbjct 710600 ACGGATGCGGTGGACGTTCAAACCAATACCACCAGCCATCTTGGAGAT--CATGGCACAC 710657
Query 139716 GCGT--AATGTCTCGTATATACCTCTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCAT 139773
| | | || ||||| ||||| ||||||||||||| ||| |||||| ||||||
Sbjct 710658 GTCTTCAGAGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCGACCAGGAAGCAT 710717
Query 139774 GACGAAAGTTGCGGTAGTTTCGTGCCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAAC 139833
|| || || || | | | || || || || || || || || || |||||
Sbjct 710718 GAGGACAGCTGGGCTTGCGGGGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGGTGAAG 710777
Query 139834 ATTTGTTTCGACATCAATTCGTACGTTTCGATGGCGCTCACAATATCCCTTCCGTGGATA 139893
| | | ||||| | | ||| || |||| | | | |||| || ||| |||
Sbjct 710778 AACTTGCTGGACATGAGGTGGTATGTCTCGAGAACACGCTCAATGTCGTCTCCCCAGATG 710837
Query 139894 CCGACAGAGACTCGCATCAGCATATGTTGGATCCGTTCGGCCACCGCGCCCTCGAttttt 139953
|| || | |||||||| | ||| || || ||| ||| | | | ||| |||| ||
Sbjct 710838 CCAACGGCCACTCGCATGATCATGTGCTGTGGCCGCTCGACAATCTTGCCGTCGAGCTTG 710897
Query 139954 ttCAG--ATAACCGTTCTCTAGGGTCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
|| || | || ||| || |||||| |||||||||| |||||||| ||
Sbjct 710898 AGGAGGTATGATCG--CTCCAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAGTC 710950
>seq2
Length=5759010
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || ||||| || || || || ||||| || || | ||
Sbjct 4160784 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCC 4160725
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || ||||| || ||||| || || || ||||| || ||
Sbjct 4160724 GACACCATCGACAATGTGAAGTCCAAGATTCAGGACAAGGAGGGCATTCCTCCTGACCAG 4160665
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| | ||||| || || || ||||| |||||| | | | | ||||| || |||
Sbjct 4160664 CAGCGTCTCATCTTCGCTGGAAAGCAGCTCGAGGATGGCCGTACCCTCTCAGACTACAAC 4160605
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
|| || ||||| || || || ||| | || | || | ||||| ||
Sbjct 4160604 ATCCAGAAGGAGTCTACCCTTCACCTTGTCCTCCGCCTTCGCGGTGG 4160558
Score = 82.4 bits (90), Expect = 7e-11
Identities = 155/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762
||||||||| || | || || || || || || || || || || || || || | |
Sbjct 3574377 GATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTC 3574436
Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|||||| | || | || || |||||||| ||||| || || || || || || ||
Sbjct 3574437 CGACACCATCGACAACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATCCCCCCGGACCA 3574496
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| || ||||||||||||| || ||||| |||||| | | | || || || ||
Sbjct 3574497 GCAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAA 3574556
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930
||| || ||||| || || ||| |||| |||| |||| || ||
Sbjct 3574557 CATCCAGAAGGAGAGCACCCTCCACCTGGTCCTGCGCCTGCGTGGTGG 3574604
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449897526891640
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