Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq7 122 7e-23 >seq7 Length=2761852 Score = 122 bits (134), Expect = 7e-23 Identities = 217/317 (68%), Gaps = 0/317 (0%) Strand=Plus/Plus Query 34318 TCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGC 34377 || ||||| ||||| | || | | || | |||||||||| ||| || ||||| || Sbjct 1622515 TCGGTCTCAGGGTTCTTGCACTTCTTGCAGAGCACAAACTTGTTGATAAAGCCATCGAGG 1622574 Query 34378 AGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAA 34437 | ||||| | ||| ||| ||||| | |||||| | ||| | || || | ||| Sbjct 1622575 TGATCCTGCAGCTTGGCGGCATCGTGAGCGCCGTTAATGATCCAACGGTCATCCTTGGGG 1622634 Query 34438 TCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGCCGGA 34497 || | | || || || || |||||| | || |||||||| | || | | || Sbjct 1622635 TCAATGTTGGTCTGAGCACCAAGCTCGAAACCAAAGTACTTGATGACATAGGAGCCAGGC 1622694 Query 34498 CGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTTGCCC 34557 || |||| | || ||||| ||||| |||||||| |||||||||||||||||||| Sbjct 1622695 CGGGCAAGGGACTGGGCGACGCTGGGCAGGTTGACGACAACAGTCTTGATGCCGTTGCCT 1622754 Query 34558 TTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGCCACA 34617 || ||||| | ||||| |||||| ||| |||||||| ||||| || || ||| Sbjct 1622755 TTGCCTTCAATCTTGGTCTGGATGCGTTCCATCTTGTAGCGATAGAAAGCATCGCTGACA 1622814 Query 34618 TTGCGGTTAACGTTCAC 34634 | |||| ||||| || Sbjct 1622815 TCGCGGCGGACGTTGAC 1622831 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412841534590409