Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_023423.1
Length=610033
Score E
Sequences producing significant alignments: (Bits) Value
seq4 87.8 7e-12
>seq4
Length=3617723
Score = 87.8 bits (96), Expect = 7e-12
Identities = 124/170 (73%), Gaps = 7/170 (4%)
Strand=Plus/Plus
Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743
||| ||||| | ||||| ||||||||||| |||||||| | |||||||||| |||||
Sbjct 2167289 CTCAATCAAGTGAGCGATTGTCATACGAGATGGAATGGCGTGGGGGTTGATGATGATGTC 2167348
Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTT-CAGGTACAATCAAACCAA 309802
|| | | || ||| |||| ||||| || |||| | |||| | | | |||||
Sbjct 2167349 TGGCGTGAGGCCTTCTCTTG---TGAACGGCATGTCCTCTTGCCGGTA-AGTGACACCAA 2167404
Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAATGATTGGG 309852
|||| ||||| || |||| | || || ||||||||||| || |||||
Sbjct 2167405 TAGTGCCCTTCTGTCCGTGACGAGAGGCGAACTTGTCACCGAT--TTGGG 2167452
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1951974074874264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |