Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_023423.1 Length=610033 Score E Sequences producing significant alignments: (Bits) Value seq4 87.8 7e-12 >seq4 Length=3617723 Score = 87.8 bits (96), Expect = 7e-12 Identities = 124/170 (73%), Gaps = 7/170 (4%) Strand=Plus/Plus Query 309684 CTCCATCAACTTGGCGATAGTCATACGAGAAGGAATGGCAAGAGGGTTGATGAGAATGTC 309743 ||| ||||| | ||||| ||||||||||| |||||||| | |||||||||| ||||| Sbjct 2167289 CTCAATCAAGTGAGCGATTGTCATACGAGATGGAATGGCGTGGGGGTTGATGATGATGTC 2167348 Query 309744 AGGTCTCATTCCGGTGATTGGGTTGAAAGGCATATCTTCTT-CAGGTACAATCAAACCAA 309802 || | | || ||| |||| ||||| || |||| | |||| | | | ||||| Sbjct 2167349 TGGCGTGAGGCCTTCTCTTG---TGAACGGCATGTCCTCTTGCCGGTA-AGTGACACCAA 2167404 Query 309803 TAGTTCCCTTTTGAGCGTGCCTGGAAGCAAACTTGTCACCAATGATTGGG 309852 |||| ||||| || |||| | || || ||||||||||| || ||||| Sbjct 2167405 TAGTGCCCTTCTGTCCGTGACGAGAGGCGAACTTGTCACCGAT--TTGGG 2167452 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1951974074874264