Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_024446.1
Length=306862
Score E
Sequences producing significant alignments: (Bits) Value
seq2 100 6e-16
>seq2
Length=5759010
Score = 100 bits (110), Expect = 6e-16
Identities = 144/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 82596 CGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCG 82655
|| || || | ||| || || || || ||||| || || || ||||| || ||| |||
Sbjct 4160284 CGGAGGACGAGGTGGAGTGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTTCGGCCG 4160343
Query 82656 TCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTA 82715
|| || || || || ||||||||||| || | || || || ||||| || || |||||
Sbjct 4160344 TCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTG 4160403
Query 82716 TCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATC 82775
|| || ||||| | || || || || || || ||| | || || || | ||| |||
Sbjct 4160404 TCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCAACCTCGAGAGTAATC 4160463
Query 82776 GTCTTGCCTGTCAACGTCTTTAC 82798
|||||||| |||| ||||| ||
Sbjct 4160464 GTCTTGCCGGTCAGGGTCTTGAC 4160486
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 981827036464407
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