Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq7 208 7e-49
seq2 89.7 5e-13
>seq7
Length=2761852
Score = 208 bits (230), Expect = 7e-49
Identities = 984/1538 (64%), Gaps = 45/1538 (3%)
Strand=Plus/Plus
Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952
||||| || || ||||| || || || ||||||| | || | ||| |||| | |||
Sbjct 709452 TTGACAACCTGGAACTCACCAGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGC 709511
Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012
|| || | || || ||||| | || || | ||| | || || |||||| || ||
Sbjct 709512 TCGAAGCATTCGTTGTTGCCCAGGATCTGAGAAGTGCTGGCAGTGGGCATGGGAGCGACG 709571
Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAAAGTTTGCCAGTCCCAC 147072
| ||| || || | ||||| | | ||| | ||||| | | | ||| ||||||
Sbjct 709572 AGCAAGCTGTTGCGGACACCGTGCTCCTTGATCTGCTCCTTGAGGGAGTCCCACTCCCAC 709631
Query 147073 A--TCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGAC 147130
| ||| |||||| | |||| ||||||||| ||||| || | || | |||||
Sbjct 709632 AGGTCG--GAGGGCTTGACGTCCCACATGTCATACTGCAGGATGCCCTCAGATGCGGGTG 709689
Query 147131 TGCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCGCCAATTCACAGCTTGCCTCGAGCG 147190
|| ||||| ||| || || || || | || | ||||| || |
Sbjct 709690 ATCCCTTGAACGATTCGTACGGGCCCTCAATCTTGGCAATCTCCATGGAAGCCTCAAGGG 709749
Query 147191 CTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGT 147250
| ||| ||| ||||| ||| ||| || ||||| || || || || |||
Sbjct 709750 CGGCATGGTAAATGGTCTCGAAGATCTGCTTGTTCAGCTCGCGAGCCTCAGGAGACTCAA 709809
Query 147251 AAGGCATACGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGTC 147310
| |||| ||||||| | || || || || | |||||| | |||||| || |||||||
Sbjct 709810 AGGGCAGACGCAGAGCGAGGAACGCGTCAGCAAGACCCTGAACACCGACACCAATAGGTC 709869
Query 147311 GATGCTTTTCGTTGCTGCGCTTCGCGCTCGCT--ATGGGATAGTGGTTGCGATCAATAAT 147368
| || ||||||| | || || || | || || ||||| |||||| ||
Sbjct 709870 GGTGGCGCATGTTGCTGT--TGCGGGCCTCCTGGACAGGGTAATGGTTCACATCAATGAT 709927
Query 147369 CTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCATAAGT 147428
|||||||||||| || || || || || | | | || |||| ||| || ||
Sbjct 709928 GCGGTTGAGGTTACGGACGACCACCTTGGTGACTTCGTGAAGCTTCTTGAAGTCGTAGCA 709987
Query 147429 CCCGTCTTCG-ACACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGACGGCCG 147487
|| || | | | || ||| | | | ||| | ||| |||| |||||||| ||
Sbjct 709988 TCCTTCGTTGTAGTCG-ACGAAGGCGGGGAGGGCCAGAGAGGCCAAGTTGCAGACAGCAA 710046
Query 147488 TCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTT---GCTGCATTTTATGA 147544
||| |||| | | | ||||| | ||| || | ||| ||||| ||||| | |
Sbjct 710047 CCTCATCGGGGGCACAGTACTCGATGATCTCAGTGCAGAGGTTAGAGCTGCGGATAGT-- 710104
Query 147545 CTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGGTC 147604
||||| || | ||| ||||| || || ||||| || ||| |||||||| | ||
Sbjct 710105 -TCCCAGGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGT 710163
Query 147605 CGCCGGTCTCGACTTGCGTTTCAACGATAAACCTATGCAGGTCCTGCGCTCGCACCCGCT 147664
||||||||| || | || | ||| | ||| | ||| || || | ||
Sbjct 710164 TACCGGTCTCGGTCTGAGCCTCCAGGATGGAGTACCACAGCTTCTGAGCGCGGATGGTCT 710223
Query 147665 GCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTCGCCGTAGC 147724
|| || |||||| | |||||| ||||||| ||||||||| ||||||||||
Sbjct 710224 TGCGGCCACGTCCCTCGCTCTCGTACTTTTCGTACAGAGCCTCAAACTCCTCGCCGTAGC 710283
Query 147725 AATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCA---CATGTCGTCCGCGT 147781
| || |||||||| || || | | || ||||| |||| ||| || || | | ||
Sbjct 710284 AGTCAGCAAGGCCAGGGCATTCGTTGGGGCACATGAGCGTCCAGTCCAGGTTCTTCTCGA 710343
Query 147782 TAACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGCGCGCTTTGC 147841
| ||| || || || ||||| || | |||||| || | || ||||| || ||
Sbjct 710344 CA-CGCTTC--ATGAAGAGATCGGGAATCCACAGGGCAAGGAACAGGTCGCGAGC---GC 710397
Query 147842 AATCCTCGGCGC--CCATGTTGCGTTTC--AAATTAAGCACGCTATAGATGTCGGCGTGC 147897
| |||| | || || | | || | | || ||| | | | ||| ||||||||||
Sbjct 710398 GAACCTCCTCCTTACCGTGGTTC-TTGCGGAGATCAAGGAAGTCAAAGACGTCGGCGTGC 710456
Query 147898 CAGGGTTCAATGTAGACGGCCAGCGCACCTTTACGCTTT---CCGCCCTGGTCGACATGG 147954
||||| || | ||||| ||| | ||||| |||||| |||||||||||||| |
Sbjct 710457 CAGGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTGCCGCCCTGGTCGACGTAT 710516
Query 147955 CGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCGTTGGTG 148014
|| | ||||||| || || |||| |||||| | |||| | | ||||||||||||
Sbjct 710517 CGAGCAGTGTTGTTGAAGACTCGCAGCATGGGGATAATGCCGTTGGAGGTGCCGTTGGTG 710576
Query 148015 GAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCGCC-GCC 148073
|| | | |||| ||| || | ||| ||||| | ||||| || || |||
Sbjct 710577 CCGGCAATGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTCAAACCAATACCACCAGCC 710636
Query 148074 GTACTTTGATATGGCAGCGCAATCGCC--CAATGTCGTGTAGATGCCGTCGATGCTGTCG 148131
| ||| || || || ||| || | || || |||||| || || |||||||||
Sbjct 710637 AT-CTTGGAGAT--CATGGCACACGTCTTCAGAGTGTCGTAGATACCCTCAATGCTGTCG 710693
Query 148132 TTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCCGAGAAA 148191
| || | | | | || || || || ||| || | | | || || || |||
Sbjct 710694 TCCTTCATGTCGACCAGGAAGCATGAGGACAGCTGGGCTTGCGGGGTACCAGCATTGAAG 710753
Query 148192 AGGGTGGGACTCGCGTGCGTAAACAATTT--TTGACTCATCATGCGATACGTCTCAATAG 148249
|||||||| || || || || || || | ||| || | | | || ||||| | |
Sbjct 710754 AGGGTGGGGGAGGCATGGGTGAAGAACTTGCTGGAC--ATGAGGTGGTATGTCTCGAGAA 710811
Query 148250 CGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTGTGGTC 148309
| || |||||||| || ||||| | || || ||||||| |||||||||||| |
Sbjct 710812 CACGCTCAATGTCGTCTCCCCAGATGCCAACGGCCACTCGCATGATCATGTGCTGTGGCC 710871
Query 148310 GTTCGGCAA-CTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTAACCA 148368
| ||| ||| |||| || || |||||| || ||| || || || ||| | |||
Sbjct 710872 GCTCGACAATCTTG-CCGTCGAGCTTGAGGAGGTATGATCGCTCCAGCGTCTTGAAGCCA 710930
Query 148369 AAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406
||||| | ||| | || ||| | ||||| |||||||
Sbjct 710931 AAGTATTGGTAGTTGAAGTCTCGGTCGTAGACGATGGC 710968
>seq2
Length=5759010
Score = 89.7 bits (98), Expect = 5e-13
Identities = 153/222 (69%), Gaps = 0/222 (0%)
Strand=Plus/Minus
Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961
||||| ||||| |||| || | | | ||| || || |||||||||||||||| |||
Sbjct 3574599 ACGCAGGCGCAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAGGGT 3574540
Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCC 132021
|| ||| |||||||| || |||| | |||| || ||||| || || || || |||||
Sbjct 3574539 GCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCC 3574480
Query 132022 TTCTTTATCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGAC 132081
|| || || || || || | | || | || |||| | |||||| || |
Sbjct 3574479 CTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACCTCAAG 3574420
Query 132082 CGTCAGCGTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| | ||| || || || || || || | ||||||||||||
Sbjct 3574419 GGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 3574378
Score = 84.2 bits (92), Expect = 2e-11
Identities = 136/196 (69%), Gaps = 0/196 (0%)
Strand=Plus/Plus
Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989
||||| || || ||||||||||| | |||||| ||| |||||||| || || |
Sbjct 4160591 GACTCCTTCTGGATGTTGTAGTCTGAGAGGGTACGGCCATCCTCGAGCTGCTTTCCAGCG 4160650
Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049
|||| |||||||| || || ||||| ||||| || || || ||| || ||||
Sbjct 4160651 AAGATGAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGAATCTTGGACTTCACA 4160710
Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109
| || | || |||| || ||| || |||| || | || || || || || || ||
Sbjct 4160711 TTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTG 4160770
Query 132110 ATGAAAATCTGCATGA 132125
| ||| ||||||||||
Sbjct 4160771 ACGAAGATCTGCATGA 4160786
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476611122550680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |