Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq2 176 5e-39 >seq2 Length=5759010 Score = 176 bits (194), Expect = 5e-39 Identities = 501/778 (64%), Gaps = 64/778 (8%) Strand=Plus/Minus Query 146787 CATGGGGATGGAGGGGTGCGGGTGGTAGCCCTCGAGGGCAAAATCTTCTGCCCTGAAATC 146846 ||||||||| || || |||| || |||| || | |||| || || || | | | Sbjct 4488430 CATGGGGATCGATTTATGGGGGTCATATCCCTTGACGACAAAGTCCTCGACCTTCCAGCC 4488371 Query 146847 GTCTATGTCCTCCACCCG----CCTCAAAATCTTGAGCTTGGGGAAGGGTCGGGGGTTCC 146902 ||| ||| | || ||| || | ||||| |||| |||||| || || || | | Sbjct 4488370 GTCGATG-CTGCCGCCCTTTTCCCGCGTAATCTCCAGCTCGGGGAACGGCCGCGGCTCGC 4488312 Query 146903 TGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGG 146962 | ||||| | || |||| || | ||||| || ||||||||| ||||| |||| | Sbjct 4488311 GCTCGAGCTGTGTCTTAAGGGCATCGATGTGGTCGATGTAGACGTGGGCGTCTCCCATGA 4488252 Query 146963 TGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCG 147022 ||| | | |||||| ||| || ||||||||| | ||||| ||||| |||| Sbjct 4488251 CGTGTGTGAGGCTTCCCGGCACCAGGTCGCACACGTGGGCGAGCATGTGCGTGAGAAGCG 4488192 Query 147023 AGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCT 147082 |||||| || ||||||||||||| || ||||||||||| | |||| |||||| |||| Sbjct 4488191 CGTAGCTTGCAATGTTGAAGGGGATGCCGAGGCCCATGTCGCAGGACCGCTGGTAGAGCT 4488132 Query 147083 GGCA------------------------------CGAGAGCTC--------------CCC 147098 |||| |||| |||| ||| Sbjct 4488131 GGCAGTGGAGGTGGCCCTTTGGCTTGTTCTCCTCCGAGGGCTCGGGGGCGTCGACGCCCC 4488072 Query 147099 GTC---GGCC----------ACGTAAAACTGGCACAGGATGTGGCACGGCGGCAGCGCCA 147145 | | |||| ||||| |||||| | ||||||||||||||||| |||| Sbjct 4488071 GGCCGCGGCCCGGGTACGAGACGTAGAACTGGGCGAACATGTGGCACGGCGGCAGGGCCA 4488012 Query 147146 TGGCGGGCAGGTCCGCG-GGGTTCCAGGCCGAGACCACCAGCCGCCTGCTCTCGGGGTTC 147204 || | ||| ||| |||||||| || || | || ||||||| | |||||| Sbjct 4488011 TGCTCTTGAAGTC-GCGCGGGTTCCACGCGCTGAGGATCATCCGCCTGTCGTAGGGGTTG 4487953 Query 147205 CTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTC 147264 | | || | || | | ||||||||| || |||| |||| ||||| | Sbjct 4487952 GTGCGCAGCTTGTGGACGATCTCGGCCAGCTGGTCGACACCCTTGCCCGTGTAGTCAGCG 4487893 Query 147265 CCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGG 147324 ||| ||| |||||| ||| |||||||||| ||||||||||||||| || || |||||| Sbjct 4487892 CCGGCGTCGACGTACTCGGCGCCAAAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGG 4487833 Query 147325 TCGCCGGGCTTTCTGTGCGAGAAGCCCGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCG 147384 |||||| | | ||||| | ||| | | | ||| |||||| |||| |||| | || Sbjct 4487832 TCGCCGACGTCGCGGTGCGTCAGGCCGACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCG 4487773 Query 147385 TCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAAC 147444 |||||||| || || | || ||| |||| || ||| |||| ||||||| Sbjct 4487772 TCCCAGATCTTGACGCCGACGTCGCTGAGGGCCTTGGACGAGGTGTTGCCCTCGATGAAC 4487713 Query 147445 CAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGGGA 147502 ||||| ||||| | | || | | ||||| | ||| ||||| || ||||||| Sbjct 4487712 CAGAGGAGCTCGGCGACGACGGCGCGGAGGAAGACACGCTTCGTGGTGAGGAGGGGGA 4487655 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487905183200