Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq7 223 5e-52
seq2 86.0 9e-11
>seq7
Length=2761852
Score = 223 bits (246), Expect = 5e-52
Identities = 366/512 (71%), Gaps = 22/512 (4%)
Strand=Plus/Plus
Query 1455775 GATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCGACC 1455834
||| ||| |||||||| || ||||||||||| ||||| ||||| ||||||||| | ||||
Sbjct 1550817 GATCTGGCAAATGTAC-AAGAAGGCCGAGGCTTCCTTCTGGACTGCCGAGGAGATTGACC 1550875
Query 1455835 TCGGCGCCGACACGGTCCACTGG--GTGTCG-CTGAGCGACGACGAGCGCCATTTCATCA 1455891
| | ||| | | ||||| || |||| ||| |||||| | ||||||
Sbjct 1550876 TGTCCAAGGACCTGCACGACTGGAACAACCGCCTGAACGATGACGAGAAGTACTTCATCT 1550935
Query 1455892 AGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTGGCCGGC 1455951
||| |||| ||| || ||||||||| || |||||||| ||||||||||| ||
Sbjct 1550936 CTCACATCCTGGCC-TTCTTCGCCGCCTCGGACGGCATCGTCAACGAGAACCTGGTCGAG 1550994
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| | |||||||| | || ||||| || | || ||||| |||||||||
Sbjct 1550995 CGCTTCAGCGGCGAGGTCCAGATTCCCGAGGCTCGCTGCTTCTACGGCTTCCAGATCATG 1551054
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGA-CCC 1456070
|| || ||||| ||||| || || |||||||| || |||||||| ||| ||||||| | |
Sbjct 1551055 ATGGAGAACATACACTCCGAGACGTACTCGCTGCTCATCGACACTTACATCAAGGAGCAC 1551114
Query 1456071 GGTC-GAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAAAAGG 1456129
| | | | || | ||||||| ||| || || || | || | | | || ||||
Sbjct 1551115 AGCCAGCGCAG--CTACCTCTTCAACGCGATTGAGACCATTCCTTGCATCCGCAAGAAGG 1551172
Query 1456130 CCGACTGGGCGATGAAGTGGATC---AACAAGGAGGGCCTCGACACTTTGCCGAGCGGCT 1456186
| |||||||| || |||||| |||| || |||| ||||||| |||| ||
Sbjct 1551173 CTGACTGGGCTATCCGATGGATCCAGGACAA-GAACTCCTC----CTTTGCCCAGCGCCT 1551227
Query 1456187 CGTCGGCTTTGCCG-CGTCGAGGGCATCTTTTTC-TCGG-GCAGTTTCTGCGCCATCTTT 1456243
|| | |||||||| ||||||||| ||||| ||| ||| || || | | |||||||
Sbjct 1551228 GGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGC--CTCCATCTTC 1551285
Query 1456244 TGGCTCAAGAAGCGCGGCCTCATGCCCGGTCT 1456275
|||||||||||||| || ||||||||||| ||
Sbjct 1551286 TGGCTCAAGAAGCGGGGTCTCATGCCCGGCCT 1551317
Score = 196 bits (216), Expect = 7e-44
Identities = 349/505 (69%), Gaps = 17/505 (3%)
Strand=Plus/Minus
Query 259682 CACAAGGAGGTCCTCGACGCTGCCATCTGCCACGGCCGAGACTTTGGCTACTCGTACTTT 259741
|||||||||| |||||| | |||||| | ||| ||||||||| |||| ||||||
Sbjct 710989 CACAAGGAGGAGCTCGACTCCGCCATCGTCTACGACCGAGACTTCAACTACCAATACTTT 710930
Query 259742 GGTCTGGCGACCTTGCGCCGGTCCTACCTGACCAAAGTGCGCGATATTGTCGTCGAGCGG 259801
|| | ||| || || || ||||| ||| | || | | |||||||||
Sbjct 710929 GGCTTCAAGACGCTGGAGCGATCATACCTCCTCAAGCTCGACGGCAAGATTGTCGAGCGG 710870
Query 259802 CCCCAGTATATGCTCATGCGTGTCGCCCTTGGCCATTATGGGTTTGCCGACGTCGACAAT 259861
|| ||| | ||| ||||||| || ||| ||||| | |||| || | ||||| |
Sbjct 710869 CCACAGCACATGATCATGCGAGTGGCCGTTGGCA--TCTGGG------GA-GACGACATT 710819
Query 259862 GCGCTGGAGCACGTGCTCGCCACCTACGAGGCCATGTCGCAGCA-GTTGTTCACCTCAGC 259920
| ||| || |||| || ||| | |||||| ||||| ||| |||||| ||
Sbjct 710818 G------AGCGTGTTCTCGAGACATACCACCTCATGTC-CAGCAAGTTCTTCACCCATGC 710766
Query 259921 GACGCCCACGCTCTTTAATGCCGGCACGCCGCGCCCGCAGAATTCGTCGTGCTTTCTGTT 259980
| ||||| ||||| ||||| || || |||| | ||| || || ||||| ||| |
Sbjct 710765 CTCCCCCACCCTCTTCAATGCTGGTACCCCGCAAGCCCAGCTGTCCTCATGCTTCCTGGT 710706
Query 259981 GGACATGAAGGCCGATTCGATCGAGGGCATCTATGACACGCTCAAGCAGTGCGCGCTCAT 260040
|||||||||| ||| || ||||| ||||| ||||| || ||| ||| || | ||
Sbjct 710705 CGACATGAAGGACGACAGCATTGAGGGTATCTACGACACTCTGAAGACGTGTGCCATGAT 710646
Query 260041 CTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCACACAAGGTGCGCGCCGCGGGCGCCTA 260100
||||||| ||| || || || ||||| || ||| | || ||| | ||| ||||
Sbjct 710645 CTCCAAGATGGCTGGTGGTATTGGTTTGAACGTCCACCGCATCCGTGCCACCGGCTCCTA 710586
Query 260101 CGTGGCGGGCACCAACGGCCAGTCCAACGGCCTTGTGCCCATGCTTCGCGTTTTTAACGA 260160
| | || |||||||||||| ||||||||| || | |||||||| || || || ||| |
Sbjct 710585 CATTGCCGGCACCAACGGCACCTCCAACGGCATTATCCCCATGCTGCGAGTCTTCAACAA 710526
Query 260161 CACGGCGCGCTACGTCGACCAGTGC 260185
||| || || |||||||||||| ||
Sbjct 710525 CACTGCTCGATACGTCGACCAGGGC 710501
Score = 120 bits (132), Expect = 4e-21
Identities = 184/255 (72%), Gaps = 8/255 (3%)
Strand=Plus/Plus
Query 1456523 ATCATCGTCGAGGCCGTCGAGATCGAGAAAGAGTTTGTCAGCGAGTCGCTGCCGGTGGCG 1456582
|||||| ||| |||||| |||||| | ||||| | | |||| | ||||| | |||
Sbjct 1551427 ATCATCACCGACGCCGTCCGCATCGAGCAGGAGTTCCTGACCGAGGCCCTGCC--TTGCG 1551484
Query 1456583 CTCATC--GGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCG 1456640
||| | ||||||||| ||| | || ||| ||||||||||||||| || ||||||||
Sbjct 1551485 CTCTGCTGGGCATGAACTCCAAC-CTGATGAAGCAGTACATTGAATTT-GTTGCCGACCG 1551542
Query 1456641 CCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGA 1456700
|||||| | || |||||| || ||||| ||| | || ||||||| || | |
Sbjct 1551543 CCTGCTGGTCGCTCTCGGCAACG-AGAAGGTGTACAAGTCGTCCAACCCCTTTGACTTTA 1551601
Query 1456701 TGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGT-GGCGAGTACG 1456759
||||| ||||| || | |||||||||||||| || ||| ||||| | ||| |||
Sbjct 1551602 TGGAGAACATCTCCCTGGGCGGCAAGACCAACTTCTTTGAGAAGCGCGTCGCCGACTACC 1551661
Query 1456760 CCAAGGCCGGCGTCA 1456774
||||| || ||||
Sbjct 1551662 AGAAGGCTGGTGTCA 1551676
Score = 87.8 bits (96), Expect = 3e-11
Identities = 171/253 (68%), Gaps = 0/253 (0%)
Strand=Plus/Plus
Query 2133582 ATTGACTTTTTCTCCATGTGCGAGCACCACCTGCTGCCCTTTATCGGCAAGGCCCACGTG 2133641
|||||| | |||||| | ||||||||||||||| | ||||| | |||||||| ||| |
Sbjct 51196 ATTGACATCTTCTCCCTCTGCGAGCACCACCTGGTACCCTTCACCGGCAAGGTGCACATC 51255
Query 2133642 GGCTACCTGCCCGCGGGCAAGATCATCGGTCTGAGCAAGATCCCGCGCATCGTCGACATG 2133701
|||||| | ||| | ||||||| | |||| | |||||||| | |||||||
Sbjct 51256 GGCTACATCCCCAACAACGCCGTCATCGGCATCTCCAAGCTGCCGCGCATTGCCGACATG 51315
Query 2133702 TTTTCCGACCGCTTCCAAGTACAGGAGGCACTCACGCGCCAGATCGCCGAGAGCGTGAGC 2133761
|| ||| |||| | || | |||||| || ||| | |||||| | | | |
Sbjct 51316 TTCTCCCGCCGCCTGCAGATCCAGGAGCGCCTTACGAAAGAAATCGCCAACGCCATCTTC 51375
Query 2133762 CAGGTTACGGGCGCGCGCGGCGTCGGCGTCGTCCTCGAGGGCCTGCACATGTGCGTGTGT 2133821
| || | | | | ||||||| ||| ||| | ||| | ||| ||||| ||
Sbjct 51376 GACGTCCTGCGGCCCCAGGGCGTCGCCGTGGTCATAGAGTCCAGCCACCTGTGCATGGTG 51435
Query 2133822 ATGCGCGGCGTGC 2133834
|||||||||||||
Sbjct 51436 ATGCGCGGCGTGC 51448
>seq2
Length=5759010
Score = 86.0 bits (94), Expect = 9e-11
Identities = 106/145 (73%), Gaps = 0/145 (0%)
Strand=Plus/Minus
Query 724998 GACATGATCGACCGCATCGGCACCGAGGCCGGTCGCCTGGCGCGCTCCAACAAGCGCAAC 725057
||||| |||| ||| | | ||||||||| ||||| || ||||||| |
Sbjct 1996753 GACATCTTCGAGCGCGTTGCCACCGAGGCTTCCAAGCTGGCCGCCTACAACAAGAAGTCC 1996694
Query 725058 ACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGCCTGATCATGCGCGGCGAACTGGCC 725117
|| ||| | || ||||||||||| |||| || |||||| ||| ||||| ||||||
Sbjct 1996693 ACAATCTCTTCCCGAGAGATCCAGACGTCCGTCCGACTGATCCTGCCGGGCGAGCTGGCC 1996634
Query 725118 AGGCACGCCGTCTCCGAGGGCACCA 725142
| |||||||||||| ||||||||||
Sbjct 1996633 AAGCACGCCGTCTCTGAGGGCACCA 1996609
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177809946126106
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |