Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_027923.1
Length=132831
Score E
Sequences producing significant alignments: (Bits) Value
seq2 107 2e-18
>seq2
Length=5759010
Score = 107 bits (118), Expect = 2e-18
Identities = 139/192 (72%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116
|| || ||||| ||||||||||||| |||| ||||||| ||||| ||||| ||| ||
Sbjct 4160080 TCCTTCTGAATGTTGTAGTCGCTCAGAGTGCGGCCGTCTTCCAGCTGCTTACCAGCGAAA 4160139
Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176
|| || ||||| || ||||| || | ||||||||| || ||||||| || | | |
Sbjct 4160140 ATCAGGCGCTGCTGGTCCGGGGGAATACCCTCTTTGTCCTGGATCTTGGACTTGACGTTG 4160199
Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236
|| | || || | | ||| || || || || |||| || || || || || || ||
Sbjct 4160200 TCGATGGTATCGGATGATTCGACCTCCAGGGTGATAGTCTTTCCTGTGAGGGTCTTGACG 4160259
Query 27237 AAGATTTGCATA 27248
||||| ||||||
Sbjct 4160260 AAGATCTGCATA 4160271
Score = 98.7 bits (108), Expect = 8e-16
Identities = 137/192 (71%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 27057 TCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAA 27116
|| || || || ||||||||||||| | || ||||||| ||||| ||||| ||| ||
Sbjct 4159852 TCCTTCTGGATGTTGTAGTCGCTCAGAGTCCGACCGTCTTCCAGCTGCTTACCAGCGAAA 4159911
Query 27117 ATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTT 27176
|| || ||||| || || || || | |||||| || || |||||| || | | |
Sbjct 4159912 ATCAGGCGCTGCTGGTCAGGAGGGATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTG 4159971
Query 27177 TCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACA 27236
|| | || || | | ||| ||||| ||||| || | || |||||||| || || ||
Sbjct 4159972 TCGATGGTATCAGATGATTCCACTTCCAGAGTAATCGTCTTACCCGTCAGTGTCTTAACG 4160031
Query 27237 AAGATTTGCATA 27248
||||| ||||||
Sbjct 4160032 AAGATCTGCATA 4160043
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 424934332674456
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |