Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_027925.1
Length=496396
Score E
Sequences producing significant alignments: (Bits) Value
seq7 131 5e-25
>seq7
Length=2761852
Score = 131 bits (144), Expect = 5e-25
Identities = 352/528 (67%), Gaps = 19/528 (4%)
Strand=Plus/Plus
Query 443349 GAGGAGATTGATCTCTCCAAGGACTTGGCCGATTGGAACGAACGACTATCTAGCCATGAA 443408
||||||||||| || ||||||||| || ||| |||||| | || || | | ||||
Sbjct 1550863 GAGGAGATTGACCTGTCCAAGGACCTGCACGACTGGAACAACCGCCTG---AACGATGA- 1550918
Query 443409 CGCGATTT-CTTCAAATG---CATCTTGGCCTTCTTTGCACCGAGCGACGGTATCGTCGG 443464
|| || | ||||| | |||| |||||||||| || | ||||| ||||||
Sbjct 1550919 CGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTCGCCGCCTCGGACGGCATCGTCAA 1550978
Query 443465 TGAGAATCTGGTGACGCGTTTCTACGAAATGGTAGTGTACACCGAGGCCCGCTACTTCTA 443524
||||| ||||| ||| ||| || ||| | ||||||| |||| ||||||
Sbjct 1550979 CGAGAACCTGGTCGAGCGCTTCAGCGGCGAGGTCCAGATTCCCGAGGCTCGCTGCTTCTA 1551038
Query 443525 CGCGTTCCAAGCCGCAATGGAGAACATTCACGCCGAGGTCTACAGTCAGTTGATCAAGAC 443584
|| ||||| | ||||||||||| ||| ||||| ||| | | | ||| |||
Sbjct 1551039 CGGCTTCCAGATCATGATGGAGAACATACACTCCGAGACGTACTCGCTGCTCATC--GAC 1551096
Query 443585 ACTAATTCCGAACGAAGACGAACAGCGG---TCCATCTTCTCATCGTTCATGACCACGCC 443641
||| | | || || || ||||| | | ||||| || | ||||| ||
Sbjct 1551097 ACTTACATC-AAGGAGCACAGCCAGCGCAGCTACCTCTTCAACGCGATTGAGACCATTCC 1551155
Query 443642 AGGCATCACTGAAAAGACTCGCTGGGCAAAACAGTGGCTCGA--ACGAGAAAATCTCAGC 443699
||||| | ||| || |||||| | | ||| || | || |||| ||| |
Sbjct 1551156 TTGCATCCGCAAGAAGGCTGACTGGGCTATCCGATGGATCCAGGACAAGAACTCCTC--C 1551213
Query 443700 TTCGTCGAGCGACTAGTCGCTTTTGCTGTGGTCGAAGGACTGTTGTTTAGCGGCAGCTTT 443759
|| | | |||| || || || ||||| | ||||| || | || || ||||| ||||
Sbjct 1551214 TTTGCCCAGCGCCTGGTTGCCTTTGCCGCCGTCGAGGGTATCTTCTTCAGCGGTGCCTTT 1551273
Query 443760 AGCCTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGA 443819
||||||||||||||| | || ||||| || || |||| ||| ||||||||| |||||
Sbjct 1551274 -GCCTCCATCTTCTGGCTCAAGAAGCGGGGTCTCATGCCCGGCCTGACCTTTTCCAACGA 1551332
Query 443820 ACTGATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCT 443867
|| ||| || ||||||||| |||| ||||| ||||| || ||
Sbjct 1551333 GCTCATCTCGCGTGACGAGGGTCTGCACACGGACTTTGCCTGCCTGCT 1551380
Score = 95.1 bits (104), Expect = 4e-14
Identities = 88/112 (79%), Gaps = 0/112 (0%)
Strand=Plus/Minus
Query 254971 CGGCATTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGG 255030
||||||||| || ||| | || || ||||||||| ||||| |||||||| || || ||
Sbjct 710558 CGGCATTATCCCCATGCTGCGAGTCTTCAACAACACTGCTCGATACGTCGACCAGGGCGG 710499
Query 255031 CGGCAAACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGAC 255082
| ||| || || || || || |||||||||| ||||| ||||||||||||
Sbjct 710498 CAACAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCCTGGCACGCCGAC 710447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1588335735442785
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |