Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq7 288 1e-72
>seq7
Length=2761852
Score = 288 bits (318), Expect = 1e-72
Identities = 1153/1788 (64%), Gaps = 67/1788 (4%)
Strand=Plus/Plus
Query 110331 TGAACTGAATTGGTCGGGCTTTCGCCTTTGATCGGAGATAGTACATCCCGGTCTTGAGTC 110390
||||||| || || |||| |||| | ||||| |||||||| ||||||||||| |
Sbjct 709114 TGAACTGGATAGGCGCGGCTGCGGCCTGGGTACGGAGGTAGTACATGCCGGTCTTGAGAC 709173
Query 110391 CTTGTTTCCATGCGTACATATGCATAGAAGAGAGCTTGGACATCGTTGGACTTTCCATGA 110450
| | ||||| || | ||||| | || |||| |||||| || | ||||
Sbjct 709174 CGAGCTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCATCGTGGGGTCCTTCATGT 709233
Query 110451 AGAGGTTCAT--ACTTTGACTTTGGTCAATGAAGCGCCCCCGTTGTGCCGCCATATCAAT 110508
|| ||| | ||| |||| |||| ||||| || || | |||||||| | |
Sbjct 709234 GGATGTTGAGGGACTGGGACT--GGTCGATGAAAGCACCACGATCGGCCGCCATCTGGAC 709291
Query 110509 GACATCCTTCAT-CTTA---ATTTCCCAAACTGTGCGATAGAGATTCTTGATATCATCTG 110564
|| || | || | || ||||| || || || ||| |||||| || || |
Sbjct 709292 GAT----TTGACGCTGAGAGATCTCCCAGACGGTCTTGTACAGAGCCTTGATGTCCTCGG 709347
Query 110565 GGATATCTGAGATATTCTGGATGGAACCCCCCGCCTTCACCATGAGATCCTTCATATCCT 110624
|||| | | ||| ||||||||||| || | | | ||| | | |||||| | |
Sbjct 709348 GGATGTTGGGGATGTTCTGGATGGAGCCGTTCTCGGCAATGATGCGGTTCTTCATGGCGT 709407
Query 110625 TGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACT 110684
|||||| || || | | ||||| |||| || |||||||| ||||
Sbjct 709408 CGGACCACAGGCCGGTGTCGACCAGGTCCTTGAGAAGCCAGGGGTTGACAACCTGGAACT 709467
Query 110685 CACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTAT 110744
|||| || ||| | || | |||||||||| | ||||| || || |||||||| || |
Sbjct 709468 CACCAGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCATTCGTTGT 709527
Query 110745 TACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAA 110804
| |||| ||| || | ||| ||| || ||||| || || | | | ||||| || |
Sbjct 709528 TGCCCAGGATCTGAGAAGTGCTGGCAGTGGGCATGGGAGCGACGAGCAAGCTGTTGCGGA 709587
Query 110805 GACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTA---GTTG-AGCTTGGTT 110860
||| | ||||||||| | |||||||| ||||| || | || | || || |
Sbjct 709588 CACCGTGCTCCTTGATCTGCTCCTTGAGGGAGTCCCACTCCCACAGGTCGGAG---GGCT 709644
Query 110861 TCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCTCAAAGGTT 110920
| || | ||||||||||| |||| || | || | || ||||| || |||| || | |
Sbjct 709645 TGACGT-CCCACATGTCATACTGCAGGATGCCCTCAGATGCGGGTGATCCCTTGAACGAT 709703
Query 110921 TCATA-GGAACCTTGGGCTTCAGCCAATTCACA-GCTCGCCTCCAGGGATGCGTGATACA 110978
|| || || ||| ||| | |||| || | ||||| |||| || || || |
Sbjct 709704 TCGTACGGGCCCTCAATCTT--GGCAATCTCCATGGAAGCCTCAAGGGCGGCATGGTAAA 709761
Query 110979 TGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGAATCAAATGCGTAGCGGC 111038
|||| || ||||| | |||| ||| || ||| || ||||| | | || ||
Sbjct 709762 TGGTCTCGAAGATCTGCTTGTTCAGCTCGCGAGCCTCAGGAGACTCAAAGG-GCAGACGC 709820
Query 111039 ACAAA-ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAGGTCTGTGTCGCATA 111097
| | | || | || || ||||| |||||||| | ||||||||||| ||| |||||
Sbjct 709821 AGAGCGAGGAACGCGTCAGCAAGACCCTGAACACCGACACCAATAGGTCGGTGGCGCATG 709880
Query 111098 TTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGACTCGGTTTAGATTT 111157
|| || || || || || || ||| || ||||||| ||||| || ||
Sbjct 709881 TTGCTGTTGCGGGCCTCCTGGACAGGGTAATGGTTCACATCAATGATGCGGTTGAGGTTA 709940
Query 111158 TTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATCAAAAGTGCGAGTCTCTTCA 111217
| || | ||| |||| ||| ||||| || | | || | | || ||||
Sbjct 709941 CGGACGACCACCTTGGTGACTTCGTGAAGCTTCTTGAAGTCGTA-----GCATC-CTTCG 709994
Query 111218 TTG------ACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCC 111271
||| || | || ||||| | || ||||| ||||| ||||| ||||||
Sbjct 709995 TTGTAGTCGACGAAGGCGGGGAGGGCCAGAGAGGCCAAGTTGCAGACAGCAACCTCATCG 710054
Query 111272 TTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTC 111331
| |||||| | || || || || | ||| || || || || |||| |||
Sbjct 710055 GGGGCACAGTACTCGATGATCTCAGTGCAGAGGTTAGAGCTGCGGATAGTTCCCAGGTTC 710114
Query 111332 TTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCC 111391
|| ||||| ||||| |||||| |||||||||||||||| |||| | || |||||
Sbjct 710115 TTCTGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCG 710174
Query 111392 GTCTGTGATTTGAGAATAGCCTTCCAAA-CATCGGCGGCTGGTACAATGGCGTTG--GCC 111448
||||| | | || || | | ||| | | || | | || |||| ||| |||
Sbjct 710175 GTCTGAGCCTCCAGGATGGAGTACCACAGCTTCTGAGCGCGG----ATGGTCTTGCGGCC 710230
Query 111449 -CGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGCGTCGGA 111507
|||||||| |||||||||| ||| || || ||||||||||| || ||| |
Sbjct 710231 ACGTCCCTCGCTCTCGTACTTTTCGTACAGAGCCTCAAACTCCTCGCCGTAGCAGTCAGC 710290
Query 111508 GAGACCTGGTGCCTT-GTCTGGACAGAAAAGAGACCATTGACCACCTTC--CTCAACCCG 111564
|| || || || || || || || | || | ||| | ||| ||| ||| || ||
Sbjct 710291 AAGGCCAGG-GCATTCGTTGGGGCACATGAGCGTCCAGT--CCAGGTTCTTCTCGACACG 710347
Query 111565 CTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTC 111624
||||||||| || || ||||||||||||| || || || | | ||| |||| ||
Sbjct 710348 CTTCATGAAGAGATCGGGAATCCACAGGGCAAGGAACAGGTCGCGAGCGCGAACCTCCTC 710407
Query 111625 GTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAG 111684
| ||| ||||| || | |||||||| || | || || |||||||| ||||| ||
Sbjct 710408 CTTACCGTGGTTCTTGCGGAGATCAAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAG 710467
Query 111685 ATAGACTGCGATAGATCC------CTT-TCGACGCCCAGCTTGATTTACATAGCGCGCTG 111737
|||| || | | || ||| | | ||||| | | || | || || || |
Sbjct 710468 GTAGATGGCAAAGGCACCAGGACGCTTGTTGCCGCCCTGGTCGA----CGTATCGAGCAG 710523
Query 111738 TGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAA 111797
|| ||| || || || ||||| || ||||| || | || || || || || ||
Sbjct 710524 TGTTGTTGAAGACTCGCAGCATGGGGATAATGCCGTTGGAGGTGCCGTTGGTGCCGGCAA 710583
Query 111798 TACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTG 111857
| || |||| | | |||| || || |||||||| |||||| ||| |
Sbjct 710584 TGTAGGAGCCGGTGGCACGGATGCGGTGGACGTTCAAACCAATACCACCAGCCATCTTGG 710643
Query 111858 AGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGG 111917
|||| |||||| | | ||||| | |||||||| | || ||| ||||| ||
Sbjct 710644 AGATCATGGCACACGTCTTCAGAGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGT 710703
Query 111918 CGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTG 111977
||| |||||||| ||||| ||| | | || |||||||||||||||||||| || |
Sbjct 710704 CGACCAGGAAGCATGAGGACAGCTGGGCTTGCGGGGTACCAGCATTGAAGAGGGTGGGGG 710763
Query 111978 TTGCGTGAATGAACATACCTTG--GGACATCTTGTCGTATGTCTCCAAGACAGAATCAAT 112035
|| || ||| | | |||| |||||| || ||||||||| | ||| |||||
Sbjct 710764 AGGCATGGGTGA--AGAACTTGCTGGACATGAGGTGGTATGTCTCGAGAACACGCTCAAT 710821
Query 112036 GTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
||| || || |||||| | || || ||||||| ||||| ||||||
Sbjct 710822 GTCGTCTCCCCAGATGCCAACGGCCACTCGCATGATCATGTGCTGTGG 710869
Score = 98.7 bits (108), Expect = 1e-15
Identities = 148/208 (71%), Gaps = 2/208 (1%)
Strand=Plus/Minus
Query 122658 GGCAAACTCCTGGTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGACC 122717
|||||| ||| ||| |||||||| || || || || || || || || ||| || ||
Sbjct 1551372 GGCAAAGTCCGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTGGAAAAGGTCAGGCC 1551313
Query 122718 TGGCATGAGACCCCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGAT 122777
|||||||||||||||||||| | ||| | || | | || | ||| |||||||||
Sbjct 1551312 GGGCATGAGACCCCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 1551253
Query 122778 ACCCTCCACACACGCAAACGCAAAAAGGCGTTCGGCGAAGGAGCGAG-ACTTTGCATCAA 122836
|||||| || ||||| |||| ||||| | ||| |||||| ||| ||| | | |
Sbjct 1551252 ACCCTCGACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAG-GAGTTCTTGTCCTGGA 1551194
Query 122837 ACCATTTCATTGCCCATTTCGCCTTCTT 122864
|||| || ||||| | ||||||||
Sbjct 1551193 TCCATCGGATAGCCCAGTCAGCCTTCTT 1551166
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628031897944800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |