Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq7 214 2e-50 >seq7 Length=2761852 Score = 214 bits (236), Expect = 2e-50 Identities = 1094/1721 (64%), Gaps = 45/1721 (3%) Strand=Plus/Plus Query 117798 TCAAGGCTGAACTGAATGGGTCTCGCCTT-GGCCTTTGATCGGAGGTAGTACATCCCCGT 117856 |||| | ||||||| || || | || || ||||| | |||||||||||||| || || Sbjct 709107 TCAACGGTGAACTGGATAGG-CGCGGCTGCGGCCTGGGTACGGAGGTAGTACATGCCGGT 709165 Query 117857 CTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACT 117916 |||||| || |||||||| | | ||||| || | |||| | || || Sbjct 709166 CTTGAGACCGAGCTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCATCGTGGGGTC 709225 Query 117917 TTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCAT 117976 | |||| || ||| | ||||| || |||||||| || ||||| |||||||| Sbjct 709226 CTTCATGTGGATGTTGAGGGACTGGGACTGGTCGATGAAAGCACCACGATCGGCCGCCAT 709285 Query 117977 ATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATC 118036 | | | | | ||| ||||| || ||| |||| || ||| || || || Sbjct 709286 CTGGACGATTTGACGCTGAGAGATCTCCCAGACGGTCTTGTACAGAGCCTTGATGTCCTC 709345 Query 118037 TGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATC 118096 ||||| | ||| || |||||||| || | | | ||| | | |||||| | Sbjct 709346 GGGGATGTTGGGGATGTTCTGGATGGAGCCGTTCTCGGCAATGATGCGGTTCTTCATGGC 709405 Query 118097 CTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACAAC 118153 | ||||| || || | | || |||| |||| || |||||||| Sbjct 709406 GTCGGACCACAGGCCGGTGTCGACCAGGTCCTT---GAGAAGCCAGGGGTTGACAACCTG 709462 Query 118154 AAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTC 118213 |||||||| || ||| |||| | | ||||| |||| ||||| ||||| ||||| || Sbjct 709463 GAACTCACCAGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCATTC 709522 Query 118214 ATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 118273 ||||| |||| ||| || | ||| ||| ||||||||||| || | ||| | |||||| Sbjct 709523 GTTGTTGCCCAGGATCTGAGAAGTGCTGGCAGTGGGCATGGGAGCGACGAGCAAGCTGTT 709582 Query 118274 ACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTA---GT-TGAGCT 118329 |||| ||| | ||| | || | |||||||| | |||||| || | || ||| Sbjct 709583 GCGGACACCGTGCTCCTTGATCTGCTCCTTGAGGGAGTCCCACTCCCACAGGTCGGAG-- 709640 Query 118330 TTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAA 118389 | || | | |||||| ||| |||| ||||| || | || || || ||||||| | Sbjct 709641 --GGCTTGACGTCCCACATGTCATACTGCAGGATGCCCTCAGATGCGGGTGATCCCTTGA 709698 Query 118390 ATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGAT 118449 | | || || |||||||||| || || | || | ||||| ||||| || || | Sbjct 709699 ACGATTCGTACGGGCCCTCAATCTTGGCAATCTCCATGGAAGCCTCAAGGGCGGCATGGT 709758 Query 118450 ACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTC 118509 | || || || || || | |||| | ||||| || ||||| | || | Sbjct 709759 AAATGGTCTCGAAGATCTGCTTGTTCAGCTCGCGAGCCTCAGGAGACTCAAAGGGCAGAC 709818 Query 118510 GGCACA-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTC 118568 ||| | | || | || || ||||| || ||||||| ||||| || || || | | Sbjct 709819 -GCAGAGCGAGGAACGCGTCAGCAAGACCCTGAACACCGACACCAATAGGTCGGTGGCGC 709877 Query 118569 ATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 118628 || || || || || || || || ||| ||| ||| || | | || || Sbjct 709878 ATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAATGGTTCACATCAATGATGCGGTTGAGG 709937 Query 118629 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT 118688 || | ||| ||||| |||| ||| |||||||| | | | || | | | | Sbjct 709938 TTACGGACGACCACCTTGGTGACTTCGTGAAGCTTCTTGAAGTCGTAGCATCCTTCGTTG 709997 Query 118689 TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 118748 | | ||| | || ||||| | || |||| || || |||| |||||| Sbjct 709998 TAGTCGACGAAGGCGGGGAGGGCCAGAGAGGCCAAGTTGCAGACAGCAACCTCATCGGGG 710057 Query 118749 TCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTT 118808 || |||||| || || || ||||| | ||| || || || || |||| |||||| Sbjct 710058 GCACAGTACTCGATGATCTCAGTGCAGAGGTTAGAGCTGCGGATAGTTCCCAGGTTCTTC 710117 Query 118809 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 118868 || || ||| ||| || ||||||||| |||||| | || | || ||||| || Sbjct 710118 TGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGGTC 710177 Query 118869 TGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCC 118927 || | || || || | | ||| | | || | ||| | | || | | | || || Sbjct 710178 TGAGCCTCCAGGATGGAGTACCACAGCTTCTG-AGCGCGGATGGTCTTGCGGCCACGTCC 710236 Query 118928 CTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCC 118987 ||| |||||||||| ||| || || |||||||| || || | || | || || Sbjct 710237 CTCGCTCTCGTACTTTTCGTACAGAGCCTCAAACTCCTCGCCGTAGCAGTCAGCAAGGCC 710296 Query 118988 TGGTGCCTT-ATCTGGGCAGAAGAGAGACCATTGACCA--CCCTCCTCAACCCGCTTCAT 119044 || || || | ||||| | ||| | ||| | ||| || ||| || |||||||| Sbjct 710297 AGG-GCATTCGTTGGGGCACATGAGCGTCCA--GTCCAGGTTCTTCTCGACACGCTTCAT 710353 Query 119045 GAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCC 119104 |||||| || || ||||| || || ||| || || ||| |||| | || || | || Sbjct 710354 GAAGAGATCGGGAATCCACAGGGCAAGGAACAGGTCGCGAGCGCGAACCTCCTCCTTACC 710413 Query 119105 CTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACAC 119164 || || || | || | ||||| | || || |||||||| || || ||||| | Sbjct 710414 GTGGTTCTTGCGGAGATCAAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGAT 710473 Query 119165 CGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTT 119218 || | | || | |||| || |||||| || || | |||||| ||| Sbjct 710474 GGCAAAGGCACC---AGGACGCTTGTTGCCGCCCTGGTCGACGTATCGAGCAGTGTTGTT 710530 Query 119219 AAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA--TACGA 119276 || || || ||||| || || || || | ||| ||| || || || || || || Sbjct 710531 GAAGACTCGCAGCATGGGGATAATGCCGTTGGAGGTGCCGTTGGTGCCGGCAATGTAGGA 710590 Query 119277 GACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATT 119336 | | |||| | || ||||| || || ||||||||| || ||| ||| ||||| Sbjct 710591 GCC--GGTGGCACGGATGCGGTGGACGTTCAAACCAATACCACCAGCCATCTTGGAGATC 710648 Query 119337 TGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATG 119396 || ||| | | ||| || ||||||| || || || ||| |||| | ||| Sbjct 710649 ATGGCACACGTCTTCAGAGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCGACC 710708 Query 119397 AGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGC 119455 |||||||| |||| || ||| || || |||||||| |||||||| || || | || Sbjct 710709 AGGAAGCATGAGGACAGCTG-GGCTTGCGGGGTACCAGCATTGAAGAGGGTGGGGGAGGC 710767 Query 119456 GTGGATGAACATACCTTG--GGACATCTTGTCGTAGGTCTC 119494 ||| ||| | | |||| |||||| || ||| ||||| Sbjct 710768 ATGGGTGA--AGAACTTGCTGGACATGAGGTGGTATGTCTC 710806 Score = 120 bits (132), Expect = 4e-22 Identities = 346/523 (66%), Gaps = 11/523 (2%) Strand=Plus/Minus Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074 |||||| ||| ||| |||||||||||||| |||||||| || || || ||| ||| || Sbjct 1551372 GGCAAAGTCCGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTGGAAAAGGTCAGGCC 1551313 Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134 |||||||||||||||||||| | |||||| || | ||| | || ||||||||| Sbjct 1551312 GGGCATGAGACCCCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 1551253 Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAA 130194 ||||| || || || |||| || |||| ||||||||| | ||| | | Sbjct 1551252 ACCCTCGACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAGGAGTTCTTGTCCTGGAT 1551193 Query 130195 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 130254 ||| || ||||| | ||||| || ||| || || | ||||| ||||| | || Sbjct 1551192 CCATCGGATAGCCCAGTCAGCCTTCTTGCGGATGCAAGGAATGGTCTCAATCGCGTTGAA 1551133 Query 130255 GA-GTTCCTTC-TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 130312 || || || | | ||| | || |||||||| | || ||||| || || || Sbjct 1551132 GAGGTAGCTGCGCTGGCTG--TGCTCCTTGATGTAAGTGTCGATGAGCAGCGAGTACGTC 1551075 Query 130313 TCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTAT 130371 ||| || | | | ||| || | ||| | ||||||| |||| || ||| || Sbjct 1551074 TCGGAGTGTATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGAAT 1551016 Query 130372 CTGTACCTCATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 130430 ||| ||||| | || || | | | ||||| || || || || || | | Sbjct 1551015 CTGGACCTC-GCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATGCCGTCCGAGGCGG 1550957 Query 130431 CAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCC 130487 | || || |||||||| | ||||| | || || | ||||||| || | |||| Sbjct 1550956 CGAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCC 1550897 Query 130488 AGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530 |||||| || ||||| || || || | |||||| |||||||| Sbjct 1550896 AGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCAGTCCA 1550854 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618435099504280