Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_028092.1
Length=193301
Score E
Sequences producing significant alignments: (Bits) Value
seq7 214 2e-50
>seq7
Length=2761852
Score = 214 bits (236), Expect = 2e-50
Identities = 1094/1721 (64%), Gaps = 45/1721 (3%)
Strand=Plus/Plus
Query 117798 TCAAGGCTGAACTGAATGGGTCTCGCCTT-GGCCTTTGATCGGAGGTAGTACATCCCCGT 117856
|||| | ||||||| || || | || || ||||| | |||||||||||||| || ||
Sbjct 709107 TCAACGGTGAACTGGATAGG-CGCGGCTGCGGCCTGGGTACGGAGGTAGTACATGCCGGT 709165
Query 117857 CTTGAGCCCCTGCTTCCAGGCATACATATGCATTGAGGACAACTTGGAGAGGGTTGGACT 117916
|||||| || |||||||| | | ||||| || | |||| | || ||
Sbjct 709166 CTTGAGACCGAGCTTCCAGCCGGTGAAGTGCATGCTGGTGATCTTGCCCATCGTGGGGTC 709225
Query 117917 TTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCAT 117976
| |||| || ||| | ||||| || |||||||| || ||||| ||||||||
Sbjct 709226 CTTCATGTGGATGTTGAGGGACTGGGACTGGTCGATGAAAGCACCACGATCGGCCGCCAT 709285
Query 117977 ATCAATCACATCCTTCATCTTGATTTCCCACACAGTCCTGTAGAGGTTCTTAATATCATC 118036
| | | | | ||| ||||| || ||| |||| || ||| || || ||
Sbjct 709286 CTGGACGATTTGACGCTGAGAGATCTCCCAGACGGTCTTGTACAGAGCCTTGATGTCCTC 709345
Query 118037 TGGGATATCCACGATATTTTGGATGGATCCACCCGCCTTGACCATGAGATCCTTCATATC 118096
||||| | ||| || |||||||| || | | | ||| | | |||||| |
Sbjct 709346 GGGGATGTTGGGGATGTTCTGGATGGAGCCGTTCTCGGCAATGATGCGGTTCTTCATGGC 709405
Query 118097 CTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTA---TTGACAACAAC 118153
| ||||| || || | | || |||| |||| || ||||||||
Sbjct 709406 GTCGGACCACAGGCCGGTGTCGACCAGGTCCTT---GAGAAGCCAGGGGTTGACAACCTG 709462
Query 118154 AAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTC 118213
|||||||| || ||| |||| | | ||||| |||| ||||| ||||| ||||| ||
Sbjct 709463 GAACTCACCAGCAAGGACACGTCGCTGGTAGATGTTGGAAGTGTAGGGCTCGAAGCATTC 709522
Query 118214 ATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTT 118273
||||| |||| ||| || | ||| ||| ||||||||||| || | ||| | ||||||
Sbjct 709523 GTTGTTGCCCAGGATCTGAGAAGTGCTGGCAGTGGGCATGGGAGCGACGAGCAAGCTGTT 709582
Query 118274 ACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGAGCGTCCCAGTCGTA---GT-TGAGCT 118329
|||| ||| | ||| | || | |||||||| | |||||| || | || |||
Sbjct 709583 GCGGACACCGTGCTCCTTGATCTGCTCCTTGAGGGAGTCCCACTCCCACAGGTCGGAG-- 709640
Query 118330 TTGTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAA 118389
| || | | |||||| ||| |||| ||||| || | || || || ||||||| |
Sbjct 709641 --GGCTTGACGTCCCACATGTCATACTGCAGGATGCCCTCAGATGCGGGTGATCCCTTGA 709698
Query 118390 ATGTCTCATATGGGCCCTCAACCTCCGCCAATTCGGAGCTCGCCTCGAGGGCTGCGTGAT 118449
| | || || |||||||||| || || | || | ||||| ||||| || || |
Sbjct 709699 ACGATTCGTACGGGCCCTCAATCTTGGCAATCTCCATGGAAGCCTCAAGGGCGGCATGGT 709758
Query 118450 ACATTGTTTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAGTC 118509
| || || || || || | |||| | ||||| || ||||| | || |
Sbjct 709759 AAATGGTCTCGAAGATCTGCTTGTTCAGCTCGCGAGCCTCAGGAGACTCAAAGGGCAGAC 709818
Query 118510 GGCACA-AAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTCTC 118568
||| | | || | || || ||||| || ||||||| ||||| || || || | |
Sbjct 709819 -GCAGAGCGAGGAACGCGTCAGCAAGACCCTGAACACCGACACCAATAGGTCGGTGGCGC 709877
Query 118569 ATATTAGACTTCCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTTAGA 118628
|| || || || || || || || ||| ||| ||| || | | || ||
Sbjct 709878 ATGTTGCTGTTGCGGGCCTCCTGGACAGGGTAATGGTTCACATCAATGATGCGGTTGAGG 709937
Query 118629 TTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCT 118688
|| | ||| ||||| |||| ||| |||||||| | | | || | | | |
Sbjct 709938 TTACGGACGACCACCTTGGTGACTTCGTGAAGCTTCTTGAAGTCGTAGCATCCTTCGTTG 709997
Query 118689 TCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTA 118748
| | ||| | || ||||| | || |||| || || |||| ||||||
Sbjct 709998 TAGTCGACGAAGGCGGGGAGGGCCAGAGAGGCCAAGTTGCAGACAGCAACCTCATCGGGG 710057
Query 118749 TCAGTGTACTCTATAATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTT 118808
|| |||||| || || || ||||| | ||| || || || || |||| ||||||
Sbjct 710058 GCACAGTACTCGATGATCTCAGTGCAGAGGTTAGAGCTGCGGATAGTTCCCAGGTTCTTC 710117
Query 118809 TGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTT 118868
|| || ||| ||| || ||||||||| |||||| | || | || ||||| ||
Sbjct 710118 TGGTTGCTCTTGCGGTTGCAGTGATCCTTGTAGAGCATGAAGGGGTTACCGGTCTCGGTC 710177
Query 118869 TGGGACTTGAGAATAGCCTTCCAGA-CATCGGCAGCTGGCACAGTGGCGTTGGCTCGCCC 118927
|| | || || || | | ||| | | || | ||| | | || | | | || ||
Sbjct 710178 TGAGCCTCCAGGATGGAGTACCACAGCTTCTG-AGCGCGGATGGTCTTGCGGCCACGTCC 710236
Query 118928 CTCTTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCTCTGAGAGCCC 118987
||| |||||||||| ||| || || |||||||| || || | || | || ||
Sbjct 710237 CTCGCTCTCGTACTTTTCGTACAGAGCCTCAAACTCCTCGCCGTAGCAGTCAGCAAGGCC 710296
Query 118988 TGGTGCCTT-ATCTGGGCAGAAGAGAGACCATTGACCA--CCCTCCTCAACCCGCTTCAT 119044
|| || || | ||||| | ||| | ||| | ||| || ||| || ||||||||
Sbjct 710297 AGG-GCATTCGTTGGGGCACATGAGCGTCCA--GTCCAGGTTCTTCTCGACACGCTTCAT 710353
Query 119045 GAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCC 119104
|||||| || || ||||| || || ||| || || ||| |||| | || || | ||
Sbjct 710354 GAAGAGATCGGGAATCCACAGGGCAAGGAACAGGTCGCGAGCGCGAACCTCCTCCTTACC 710413
Query 119105 CTGATTGAGACGCAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACAC 119164
|| || || | || | ||||| | || || |||||||| || || ||||| |
Sbjct 710414 GTGGTTCTTGCGGAGATCAAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGAT 710473
Query 119165 CGCGATTGACCCCTTACGACG------ACCAGCCTGGTTTACATACCTCGCAGTGGCGTT 119218
|| | | || | |||| || |||||| || || | |||||| |||
Sbjct 710474 GGCAAAGGCACC---AGGACGCTTGTTGCCGCCCTGGTCGACGTATCGAGCAGTGTTGTT 710530
Query 119219 AAATACACGAAGCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAA--TACGA 119276
|| || || ||||| || || || || | ||| ||| || || || || || ||
Sbjct 710531 GAAGACTCGCAGCATGGGGATAATGCCGTTGGAGGTGCCGTTGGTGCCGGCAATGTAGGA 710590
Query 119277 GACTTATTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATT 119336
| | |||| | || ||||| || || ||||||||| || ||| ||| |||||
Sbjct 710591 GCC--GGTGGCACGGATGCGGTGGACGTTCAAACCAATACCACCAGCCATCTTGGAGATC 710648
Query 119337 TGCGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATG 119396
|| ||| | | ||| || ||||||| || || || ||| |||| | |||
Sbjct 710649 ATGGCACACGTCTTCAGAGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCGACC 710708
Query 119397 AGGAAGCAGCTCGACATTTGAGGCCTG-GGTGTACCAGCGTTGAAGAGAGTTGGTGTCGC 119455
|||||||| |||| || ||| || || |||||||| |||||||| || || | ||
Sbjct 710709 AGGAAGCATGAGGACAGCTG-GGCTTGCGGGGTACCAGCATTGAAGAGGGTGGGGGAGGC 710767
Query 119456 GTGGATGAACATACCTTG--GGACATCTTGTCGTAGGTCTC 119494
||| ||| | | |||| |||||| || ||| |||||
Sbjct 710768 ATGGGTGA--AGAACTTGCTGGACATGAGGTGGTATGTCTC 710806
Score = 120 bits (132), Expect = 4e-22
Identities = 346/523 (66%), Gaps = 11/523 (2%)
Strand=Plus/Minus
Query 130015 GGCAAACTCCTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACC 130074
|||||| ||| ||| |||||||||||||| |||||||| || || || ||| ||| ||
Sbjct 1551372 GGCAAAGTCCGTGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTGGAAAAGGTCAGGCC 1551313
Query 130075 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGAT 130134
|||||||||||||||||||| | |||||| || | ||| | || |||||||||
Sbjct 1551312 GGGCATGAGACCCCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGAT 1551253
Query 130135 CCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAA 130194
||||| || || || |||| || |||| ||||||||| | ||| | |
Sbjct 1551252 ACCCTCGACGGCGGCAAAGGCAACCAGGCGCTGGGCAAAGGAGGAGTTCTTGTCCTGGAT 1551193
Query 130195 CCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAA 130254
||| || ||||| | ||||| || ||| || || | ||||| ||||| | ||
Sbjct 1551192 CCATCGGATAGCCCAGTCAGCCTTCTTGCGGATGCAAGGAATGGTCTCAATCGCGTTGAA 1551133
Query 130255 GA-GTTCCTTC-TTTTCTGATGGATCTTTGATGTACTTATCTATGAGTTTTGAATATGTT 130312
|| || || | | ||| | || |||||||| | || ||||| || || ||
Sbjct 1551132 GAGGTAGCTGCGCTGGCTG--TGCTCCTTGATGTAAGTGTCGATGAGCAGCGAGTACGTC 1551075
Query 130313 TCGCCATGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTTAT 130371
||| || | | | ||| || | ||| | ||||||| |||| || ||| ||
Sbjct 1551074 TCGGAGTGTATGTTCTCCATCAT-GATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGAAT 1551016
Query 130372 CTGTACCTCATCTGCAAAATTG-TTATTGATATTCTCAAAAACAATTCCATCGGACCCAG 130430
||| ||||| | || || | | | ||||| || || || || || | |
Sbjct 1551015 CTGGACCTC-GCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACGATGCCGTCCGAGGCGG 1550957
Query 130431 CAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTCC 130487
| || || |||||||| | ||||| | || || | ||||||| || | ||||
Sbjct 1550956 CGAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCC 1550897
Query 130488 AGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 130530
|||||| || ||||| || || || | |||||| ||||||||
Sbjct 1550896 AGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCAGTCCA 1550854
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 618435099504280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |