Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_028110.1
Length=171045
Score E
Sequences producing significant alignments: (Bits) Value
seq7 260 2e-64
seq3 98.7 1e-15
>seq7
Length=2761852
Score = 260 bits (288), Expect = 2e-64
Identities = 512/750 (68%), Gaps = 8/750 (1%)
Strand=Plus/Minus
Query 53193 TCATGCGCGTCGCCTTGGGTATCCACGGTGACGACTACACGCGTGTCCGTGAGACGTACG 53252
||||||| || ||| | || ||| || |||||| |||||| | ||||| |||
Sbjct 710856 TCATGCGAGTGGCCGTTGGCATCTGGGGAGACGACATTGAGCGTGTTCTCGAGACATACC 710797
Query 53253 ACTTAATGAGCCAAAAGTACTTTACGCACGCCACGCCAACCCTGTTCAACGCTGGTACGA 53312
|| | ||| | |||| ||| || || ||| | || ||||| ||||| ||||||||
Sbjct 710796 ACCTCATGTCCAGCAAGTTCTTCACCCATGCCTCCCCCACCCTCTTCAATGCTGGTACCC 710737
Query 53313 ATCACCCTCAGATGTCGAGCTGCTTCCTGGTGGCGATGAAGGATGACTCGATCGACGGCA 53372
|| | ||| |||| ||||||||||| | |||||||| ||| || || || |
Sbjct 710736 CGCAAGCCCAGCTGTCCTCATGCTTCCTGGTCGACATGAAGGACGACAGCATTGAGGGTA 710677
Query 53373 TCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTGGTCGGGTGGTATCGGTATCC 53432
||||||| || || ||| ||||||| ||||||||| | | |||||||| ||| |
Sbjct 710676 TCTACGACACTCTGAAGACGTGTGCCATGATCTCCAAGATGGCTGGTGGTATTGGTTTGA 710617
Query 53433 ACTGCTCGAACG--TCCGTGCGAACGGCACACCAATCAAGGGGACGAACGGCGTCGCCGA 53490
|| || | || ||||||| | |||| | || || || |||||| | || |
Sbjct 710616 ACG--TCCACCGCATCCGTGCCACCGGCTCCTACATTGCCGGCACCAACGGCACCTCCAA 710559
Query 53491 TGGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCCCGGTACGTCAACCAGGGTGG 53550
|| || | || ||||| || |||||||||||||| || || |||||| ||||||| ||
Sbjct 710558 CGGCATTATCCCCATGCTGCGAGTCTTCAACAACACTGCTCGATACGTCGACCAGGGCGG 710499
Query 53551 TGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCGTGGCACGCCGACATTATGGA 53610
||||| || | || ||||||||||||||||| |||||||||||| | | ||
Sbjct 710498 CAACAAGCGTCCTGGTGCCTTTGCCATCTACCTCGAGCCCTGGCACGCCGACGTCTTTGA 710439
Query 53611 GTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATGCGCTGCCGTGACCTGTTTAC 53670
|| || || || || ||| || ||| | || ||| | ||| || ||||||||
Sbjct 710438 CTTCCTTGATCTCCGCAAGAACCACGGTAAGGAGGAGGTTCGCGCTCGCGACCTGTTCCT 710379
Query 53671 AGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTGGAGAAGGACGAGGAGTGGTACCT 53730
|| ||||||||||| || ||||||||| | || |||||| || ||| ||| ||
Sbjct 710378 TGCCCTGTGGATTCCCGATCTCTTCATGAAGCGTGTCGAGAAGAACCTGGACTGGACGCT 710319
Query 53731 GATGTGCCCGAACGAGTGCCCCGGCC-TCCAGGGTGTCTACGGTGAGGAGTTTAACGAGA 53789
|||||||| ||||| ||||| |||| | | | || |||||| ||||||||| | |
Sbjct 710318 CATGTGCCCCAACGAATGCCCTGGCCTTGCTGACTG-CTACGGCGAGGAGTTTGAGGCTC 710260
Query 53790 TGTATCGGACGTACGCAGTTC-AGGGCCGCTACAAGAAGAAGGTCAAGGCGCGTGAGGTA 53848
|||| | ||||| || | |||| || | |||| || || | || |
Sbjct 710259 TGTACGAAAAGTACG-AGAGCGAGGGACGTGGCCGCAAGACCATCCGCGCTCAGAAGCTG 710201
Query 53849 TGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAACGCCGTACATGTGCTACAAGGAT 53908
||| | | ||||| || ||| ||||| || | || | |||| ||||||||||
Sbjct 710200 TGGTACTCCATCCTGGAGGCTCAGACCGAGACCGGTAACCCCTTCATGCTCTACAAGGAT 710141
Query 53909 TCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938
|||| ||||||||||||||||||
Sbjct 710140 CACTGCAACCGCAAGAGCAACCAGAAGAAC 710111
Score = 138 bits (152), Expect = 1e-27
Identities = 536/820 (65%), Gaps = 42/820 (5%)
Strand=Plus/Minus
Query 74470 CGACCCGCTTTTCAAAAAAGTTGGTCTTCCCTTCCAACGAGATGTTCTCCATCCAGTCGA 74529
|||| ||||| ||||| ||||||||||| || ||| |||||||||||||| |||| |
Sbjct 1551652 CGACGCGCTTCTCAAAGAAGTTGGTCTTGCCGCCCAGGGAGATGTTCTCCATAAAGTCAA 1551593
Query 74530 AAGGGTTCTTTGCACCGTAAATAGGCTTCTC----CCCAAACTGTGCCATGAGGCGATCC 74585
| ||||| | ||| | |||||| || | | | ||| ||||| ||
Sbjct 1551592 AGGGGTTGGACGACTTGTACAC---CTTCTCGTTGCCGAGAGCGA-CCAGCAGGCGGTCG 1551537
Query 74586 GCCACAAATTGAATGTACTGCGTCATTTCTCCCGCATCCATGCCGATGAGTTTGCACGGC 74645
|| ||||||| |||||||||| |||| | | |||||| | || ||| |||
Sbjct 1551536 GCAACAAATTCAATGTACTGCTTCATCAGGTTGGAGTTCATGCCCAGCAGAGCGCAAGGC 1551477
Query 74646 AGTGCCTCGGTGATAAACTCACTCTCCACCTCGCAAGCCCATTG-GACAATCTTGTGAAT 74704
|| |||||||| | ||||| ||| | || | | | | || || | | | ||
Sbjct 1551476 AGGGCCTCGGTCAGGAACTCCTGCTCGATG-CGGACGGCGTCGGTGATGATGTCGCGGAT 1551418
Query 74705 G---TCTTTGGAAGGGCACTTTTCCCTCAGGTGAGAGTAAAGC-GTCACGGCAAACTCCT 74760
|| ||| | || || | ||||||| |||| ||| | || |||||| |||
Sbjct 1551417 CACCTCCTTGCTGGCGCGGTTCT---TCAGGTGGGAGTGCAGCAGGCA-GGCAAAGTCCG 1551362
Query 74761 GATGCGAGCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTC 74820
||| || || || | || | || || ||||| | ||||| ||||| || |
Sbjct 1551361 TGTGCAGACCCTCGTCACGCGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGAC 1551302
Query 74821 CACGCTTCTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACAC 74880
| |||||||| | ||| ||||||| |||| ||| ||||||||||| || |||||
Sbjct 1551301 CCCGCTTCTTGAGCCAGAAGATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACGG 1551242
Query 74881 ACGCAAAGGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----ATCCAAGTCTGA 74936
|||||||| || ||||| || || || || | | ||| ||||| || ||
Sbjct 1551241 CGGCAAAGGCAACCAGGCGCTGGGCAAA-GGAGGAGTTCTTGTCCTGGATCCA--TCGGA 1551185
Query 74937 --GCCCATTCAGCTTTTCGTTTGACCGCAGGGACAG-TATCGATCGCTTGGAAGAGGCT- 74992
||||| ||||| || | | | ||| ||| | | || ||||| | |||||||
Sbjct 1551184 TAGCCCAGTCAGCCTT-CTTGCGGATGCAAGGAATGGTCTCAATCGCGTTGAAGAGGTAG 1551126
Query 74993 -TGCCTTCTCTTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAAT 75051
||| | || | | ||||||| | |||| || | || ||||||||||| || |
Sbjct 1551125 CTGCGCTGGCT--GTGCTCCTTGATGTAAGTGTCGATGAGCAGCGAGTACGTCTCGGAGT 1551068
Query 75052 GAATCGACTCGTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACAT 75111
| || ||| | | |||| | ||||||| | || ||||| | |||||| || |
Sbjct 1551067 GTATGTTCTCCATCATGATCTGGAAGCCGTAGAAGCAGCGAGCCTCGGGAATCTGGACCT 1551008
Query 75112 C--CTTTGAAAAATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAA 75169
| | |||| || | | | ||||| ||||||||||||||||||||||||| ||
Sbjct 1551007 CGCCGCTGAAGCGCTC--GACCAGGTTCTCGTTGACGATGCCGTCCGAGGCGGCGAAGAA 1550950
Query 75170 AGCCAGTACCATTTTGATAAAGTGGCGC---TCATCG-TCAGTGAGTTTGTCCCAATCCT 75225
||||| | ||| |||| | |||||| |||| | | |||| ||| || |
Sbjct 1550949 GGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAG-GCGGTTGTTCCAGTCGT 1550891
Query 75226 TCAGGTCCCCCGCCAAATCAATCTCCTCGACCGTCCAGAA 75265
||||||| | || |||||||||||| | ||||||||
Sbjct 1550890 GCAGGTCCTTGGACAGGTCAATCTCCTCGGCAGTCCAGAA 1550851
Score = 127 bits (140), Expect = 2e-24
Identities = 305/452 (67%), Gaps = 17/452 (4%)
Strand=Plus/Minus
Query 55484 CGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATGGGCAAC 55543
|||||| | ||||||| || || ||||| || || || |||||||| ||||||||
Sbjct 709585 CGCAACAGCTTGCTCGTCGCTCCCATGCCCACTGCCAGCACTTCTCAGATCCTGGGCAAC 709526
Query 55544 AACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCTAGCAGGTGAG 55603
||||| |||||||| ||||| |||||||||||| ||| || ||| || ||||||
Sbjct 709525 AACGAATGCTTCGAGCCCTACACTTCCAACATCTACCAGCGACGTGTCCTTGCTGGTGAG 709466
Query 55604 TTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTGGAACC-C 55662
|| | ||||| || ||||||||||| | | | | |||| | |
Sbjct 709465 TTCCAGGTTGTCAACCCCTGGCTTCTCAAGGACCTGGTCGACACCGGCCTGTGGTCCGAC 709406
Query 55663 GCAGATCAAGA--CGGAT-ATTGTGCGGAACGGGGGGTCCGTCCAGAA--TCTGGAGATT 55717
|| || |||| || || |||| |||||| ||| ||||||| || | |
Sbjct 709405 GCC-ATGAAGAACCGCATCATTGCCGAGAACGGC---TCCATCCAGAACATCCCCAACAT 709350
Query 55718 CCTCTGCGTC-TCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCTGAT 55776
|| | | | |||||| | ||| ||| || |||||||| | ||| ||| ||
Sbjct 709349 CCCCGAGGACATCAAGGCTCTGTACAAGACCGTCTGGGAGATCTCTCAGC---GTCAAAT 709293
Query 55777 TGAC---ATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTT 55833
| | ||| || ||||||||||| | |||||||||||||||||| || ||||||
Sbjct 709292 CGTCCAGATGGCGGCCGATCGTGGTGCTTTCATCGACCAGTCCCAGTCCCTCAACATCCA 709233
Query 55834 CATGGAGAATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGGG 55893
|||| || | || | ||| |||| | | | |||||||| ||| |||||| ||
Sbjct 709232 CATGAAGGACCCCACGATGGGCAAGATCACCAGCATGCACTTCACCGGCTGGAAGCTCGG 709173
Query 55894 ACTCAAGACGGGTATGTACTATCTGCGGACCC 55925
|||||||| || |||||||| || || ||||
Sbjct 709172 TCTCAAGACCGGCATGTACTACCTCCGTACCC 709141
>seq3
Length=4316785
Score = 98.7 bits (108), Expect = 1e-15
Identities = 282/424 (67%), Gaps = 10/424 (2%)
Strand=Plus/Minus
Query 151876 CCGGTACCGATGCCCTCTGCACCGTTGACCAGAATCATCGGCACAATAGGGGCGTAAAAC 151935
|| || ||||| || || || || |||| |||| ||| |||| ||| ||||| |||| |
Sbjct 1858498 CCCGTGCCGATACCGTCGGCGCCATTGATGAGAACCATGGGCAAAATCGGGGCATAAACC 1858439
Query 151936 TCCGGCTCCACCTGTTGACCGTCATCCATCACGTAT--TTCAAAACGGAATTGTC-AGCC 151992
|| ||||| | ||| | || || || || || || |||| || || ||| |||
Sbjct 1858438 TCGGGCTCGATCTGCTTGCCATCCTC-AT-ACTGATGCTTCAGGTTGGGATCGTCCAGC- 1858382
Query 151993 GGATCGAATATCCGTCGAGT-CATA-GGACTCAAACGCGTGAAGATGTATCGGGAGCTGG 152050
|| |||| | | | | || | ||| || ||||| ||| | || || | |||||
Sbjct 1858381 -GA-CGAAAAGATGGAGCGCGCAAACGGAGACAGGCGCGTAAAGGTATAACGAGGGCTGG 1858324
Query 152051 CCGCATCCTTGCCACCTGCCAGCCGCGTTCCAAACTGTCCAGAGGGCTCGAGGAGGTTGA 152110
| || || |||||| || || || | ||||| | || |||||| || | ||||
Sbjct 1858323 CAGCGTCGGAGCCACCGGCAAGTCGAGAACCAAAGTTACCGCTGGGCTCCAGCACATTGA 1858264
Query 152111 GGTTGTTGGCGCCCACGAAATTCTGAGCCAAATTCACAATCGTGCCCTGCAGACTCGCTT 152170
|||||| | ||||| || | ||||||| | || || ||| || ||||
Sbjct 1858263 TGTTGTTCGATCCCACAAAGTCTTGAGCCAGGCCAATGATGGTCTGCTGAAGTGAGGCTT 1858204
Query 152171 CACCGTGGTGATACGCCGTCTGCTCCGCGATGTATCCCGCCAACTGCGCCACCTTCATGT 152230
|||||||||| || || ||| | | | || ||| || |||| || | | ||||| ||
Sbjct 1858203 CACCGTGGTGGTAGGCAGTCAGTCCAGAGACGTAACCAGCCAGCTCCACAACCTTTTCGT 1858144
Query 152231 CCGTCGTCAGGTTCTTCTTGAGACAGGCGTAAATCACCTTGCGCTGGGATGGTTTCAAAC 152290
|| | || |||| ||||| ||| ||||| | |||||| ||||| || |||| |
Sbjct 1858143 CCTTGACCACGTTCCGCTTGAAACATGCGTAGAGCACCTTTCGCTGACCAGGCTTCAGTC 1858084
Query 152291 CGTC 152294
||||
Sbjct 1858083 CGTC 1858080
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 547215911077400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |