Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 1e-13 >seq2 Length=5759010 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || || || || ||| |||| || || || || ||| | ||| Sbjct 4160270 ATGCAGATCTTCGTCAAGACCCTCACAGGAAAGACTATCACCCTGGAGGTCGAATCATCC 4160211 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 || | || || | ||||| || || || |||||||| || || || || || || Sbjct 4160210 GATACCATCGACAACGTCAAGTCCAAGATCCAGGACAAAGAGGGTATTCCCCCGGACCAG 4160151 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||| || || || |||||||| | || | ||| |||||| Sbjct 4160150 CAGCGCCTGATTTTCGCTGGTAAGCAGCTGGAAGACGGCCGCACTCTGAGCGACTACAAC 4160091 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||||| |||||| ||| | || ||||| | ||| | || ||||| || Sbjct 4160090 ATTCAGAAGGAGAGCACCCTGCACTTGGTCCTCCGTCTCCGTGGTGGTAT 4160041 Score = 86.0 bits (94), Expect = 5e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 27000 GTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAG 27059 || || || |||||||||||| | |||||||| || || || | || ||| | || || Sbjct 4160486 GTCAAGACCCTGACCGGCAAGACGATTACTCTCGAGGTTGAGTCCTCTGACACCATCGAC 4160427 Query 27060 ATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATA 27119 | ||||| || || || ||||| || ||||| || || || || |||||| | || Sbjct 4160426 AACGTCAAGTCCAAGATCCAGGACAAGGAGGGCATTCCTCCTGACCAGCAGCGTCTCATC 4160367 Query 27120 TACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAG 27179 | || ||||| || | || ||| | ||| | || || |||||||| || |||||| Sbjct 4160366 TTTGCTGGCAAGCAGCTTGAGGACGGCCGAACCCTCTCTGACTACAACATCCAGAAGGAG 4160307 Query 27180 TCGAC 27184 || || Sbjct 4160306 TCCAC 4160302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434918329325760