Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_030394.2
Length=126965
Score E
Sequences producing significant alignments: (Bits) Value
seq2 114 1e-20
>seq2
Length=5759010
Score = 114 bits (126), Expect = 1e-20
Identities = 150/205 (73%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 29611 GGGAAAGGGTCTGGGCTCCCTCTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTA 29670
||| || || | ||||| | ||||||||| || | || | || | |||||| | |||
Sbjct 4488331 GGGGAACGGCCGCGGCTCGCGCTCGAGCTGTGTCTTAAGGGCATCGATGTGGTCGATGTA 4488272
Query 29671 GACGTGAGCATCTCCCAGGGTGTG-GACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAG 29729
|||||| || ||||||| | ||| | | || |||||| | || || ||||| |
Sbjct 4488271 GACGTGGGCGTCTCCCATGACGTGTGTGAGGCT-TCCCGGCACCAGGTCGCACACGTGGG 4488213
Query 29730 CCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGT 29789
| | ||||| |||||| || | |||||| || ||||| ||||| | ||||| |||||||
Sbjct 4488212 CGAGCATGTGCGTGAGAAGCGCGTAGCTTGCAATGTTGAAGGGGATGCCGAGGCCCATGT 4488153
Query 29790 CCCCTGACCTCTGGTAGAGCTGGCA 29814
| | |||| |||||||||||||||
Sbjct 4488152 CGCAGGACCGCTGGTAGAGCTGGCA 4488128
Score = 86.0 bits (94), Expect = 5e-12
Identities = 152/216 (70%), Gaps = 8/216 (4%)
Strand=Plus/Minus
Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076
|| |||| ||||||||| ||||| || || |||||||| || | || | |||| | |
Sbjct 4487868 AAGTGCCGCCACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACGTCGCGGTGCGTCAGG 4487809
Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCC--CTTCT 30134
|| |||| | || || | ||| |||||| ||||||||||||| || || | ||
Sbjct 4487808 CCGACGCTGTCGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTGACGCCGACGTCG 4487749
Query 30135 CGGAGAGCTCTTTG--GAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGAC 30192
| ||| || ||| | ||| | || ||||| || |||||| || ||||| | |||||
Sbjct 4487748 CTGAGGGC-CTTGGACGAGGTGTTG--CCCTC-GATGAACCAGAGGAGCTCGGCGACGAC 4487693
Query 30193 GGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGG 30228
||| ||||| | ||| || |||||||||||
Sbjct 4487692 GGCGCGGAGGAAGACACGCTTCGTGGTGAGGAGGGG 4487657
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 406163135648518
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |