Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_031033.1
Length=217124
Score E
Sequences producing significant alignments: (Bits) Value
seq7 114 2e-20
>seq7
Length=2761852
Score = 114 bits (126), Expect = 2e-20
Identities = 275/411 (67%), Gaps = 4/411 (1%)
Strand=Plus/Plus
Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGT-CACCATCTTCCTTAACTCGTTTCAT 78013
||||||||||| || |||||||| | | ||||| || |||| || || || |||||
Sbjct 710295 CCAGGGCATTCGTTGGGGCACATGAGCGTCCAGTCCAGGTTCTT-CTCGACACGCTTCAT 710353
Query 78014 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCC 78073
|||||||| || ||||| || |||| || || || || | | | || || || ||
Sbjct 710354 GAAGAGATCGGGAATCCACAGGGCAAGGAACAGGTCGCGAGCGCGAACCTCCTCCTTACC 710413
Query 78074 TGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 78133
||||| ||||| || || || | | || | ||||| || || || || ||
Sbjct 710414 GTGGTTCTTGCGGAGATCAAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGAT 710473
Query 78134 TGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATA 78193
|| | | ||||| || || || || ||||| || | |||| || ||||| || |
Sbjct 710474 GGCAAAGGCACCAGGACGCTTGTTGCCGCCCTGGTCGACGTATCGAGCAGTGTTGTTGAA 710533
Query 78194 AACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCC 78253
|||| || ||| || ||||| ||||| || || || || || || | ||| || ||
Sbjct 710534 GACTCGCAGCATGGGGATAATGCCGTTGGAGGTGCCGTTGGTGCCGGCAATGTAGGAGCC 710593
Query 78254 ACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGC 78313
| || || || | | | || || || || |||||||| || || | ||
Sbjct 710594 GGTGGCACGGATGCGGTGGACGTTCAAACCAATACCACCAGCCATCTTGGAGATCATGGC 710653
Query 78314 GCAACGT-TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363
| |||| |||| || |||||||||||||| || ||||| ||| ||||||
Sbjct 710654 AC-ACGTCTTCAGAGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGT 710703
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 694668687116320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |