Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq7 114 2e-20 >seq7 Length=2761852 Score = 114 bits (126), Expect = 2e-20 Identities = 275/411 (67%), Gaps = 4/411 (1%) Strand=Plus/Plus Query 77955 CCAGGGCATTCATTTGGGCACATCAATGACCAGT-CACCATCTTCCTTAACTCGTTTCAT 78013 ||||||||||| || |||||||| | | ||||| || |||| || || || ||||| Sbjct 710295 CCAGGGCATTCGTTGGGGCACATGAGCGTCCAGTCCAGGTTCTT-CTCGACACGCTTCAT 710353 Query 78014 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATTTCC 78073 |||||||| || ||||| || |||| || || || || | | | || || || || Sbjct 710354 GAAGAGATCGGGAATCCACAGGGCAAGGAACAGGTCGCGAGCGCGAACCTCCTCCTTACC 710413 Query 78074 TGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 78133 ||||| ||||| || || || | | || | ||||| || || || || || Sbjct 710414 GTGGTTCTTGCGGAGATCAAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGAT 710473 Query 78134 TGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTATTATA 78193 || | | ||||| || || || || ||||| || | |||| || ||||| || | Sbjct 710474 GGCAAAGGCACCAGGACGCTTGTTGCCGCCCTGGTCGACGTATCGAGCAGTGTTGTTGAA 710533 Query 78194 AACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAACTTCC 78253 |||| || ||| || ||||| ||||| || || || || || || | ||| || || Sbjct 710534 GACTCGCAGCATGGGGATAATGCCGTTGGAGGTGCCGTTGGTGCCGGCAATGTAGGAGCC 710593 Query 78254 ACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGCCATCTTAGATATTAGAGC 78313 | || || || | | | || || || || |||||||| || || | || Sbjct 710594 GGTGGCACGGATGCGGTGGACGTTCAAACCAATACCACCAGCCATCTTGGAGATCATGGC 710653 Query 78314 GCAACGT-TTCAATGTATCGTAGATACCCTCTATACTGTCATCCATCATGT 78363 | |||| |||| || |||||||||||||| || ||||| ||| |||||| Sbjct 710654 AC-ACGTCTTCAGAGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGT 710703 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668687116320