Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq7 107 3e-18 >seq7 Length=2761852 Score = 107 bits (118), Expect = 3e-18 Identities = 430/671 (64%), Gaps = 12/671 (2%) Strand=Plus/Plus Query 76550 CCAGGACATTCATTCGGACACATCAATGACCACTC-ACCATCTTCCTTAACCCGTTTCAT 76608 ||||| ||||| || || ||||| | | ||| || | ||||| | || || ||||| Sbjct 710295 CCAGGGCATTCGTTGGGGCACATGAGCGTCCAGTCCAGGTTCTTC-TCGACACGCTTCAT 710353 Query 76609 AAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATTTCC 76668 |||||||| || ||||| || |||| || || || || | | | || || || || Sbjct 710354 GAAGAGATCGGGAATCCACAGGGCAAGGAACAGGTCGCGAGCGCGAACCTCCTCCTTACC 710413 Query 76669 TGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATATAT 76728 ||||| ||||| ||||| || | | || | ||||| || || || || || Sbjct 710414 GTGGTTCTTGCGGAGATCAAGGAAGTCAAAGACGTCGGCGTGCCAGGGCTCGAGGTAGAT 710473 Query 76729 CGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTATTATA 76788 || | |||| || || || || || ||||| || | |||| |||||||| || | Sbjct 710474 GGCAAAGGCACCAGGACGCTTGTTGCCGCCCTGGTCGACGTATCGAGCAGTGTTGTTGAA 710533 Query 76789 AACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTTCCAGAAATATAACTTCC 76848 |||| || ||| || ||||||||||| || || || || || || | ||| || || Sbjct 710534 GACTCGCAGCATGGGGATAATGCCGTTGGAGGTGCCGTTGGTGCCGGCAATGTAGGAGCC 710593 Query 76849 ACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCCATTTTAGAGATTAGAGC 76908 ||||| || | | || || || || ||||| || ||||| | || Sbjct 710594 GGTGGCACGGATGCGGTGGACGTTCAAACCAATACCACCAGCCATCTTGGAGATCATGGC 710653 Query 76909 ACAGCGT-TTCAATGTGTCATAGATGCCCTCTATACTATCATCCATCATGTTAAGAAGAA 76967 ||| ||| |||| ||||| ||||| ||||| || || || ||| |||||| | || | Sbjct 710654 ACA-CGTCTTCAGAGTGTCGTAGATACCCTCAATGCTGTCGTCCTTCATGTCGACCAGGA 710712 Query 76968 AACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAATGTAGGAGATGCATGAG 77027 | || |||| || || || || ||||| || | || || || ||||| | Sbjct 710713 AGCATGAGGACAGCTGGGCTTGCGGGGTACCAGCATTGAAGAGGGTGGGGGAGGCATGGG 710772 Query 77028 TGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCTTCTATATC----CCAT 77083 |||| | || || | || | |||||| || | ||| || || || || Sbjct 710773 TGAAGAACTTGCTGGACATGAGGTGGTATGTCTCGAGAACACGCTCAATGTCGTCTCCCC 710832 Query 77084 TGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCTACAGTCTTATTA 77143 |||| || || || || ||||| | ||| ||||| || || || ||| |||| Sbjct 710833 AGATG----CCAACGGCCACTCGCATGATCATGTGCTGTGGCCGCTCGACAATCTTGCCG 710888 Query 77144 TTTATTTTCAACAAGTATGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAG 77203 | | || | | ||||||| |||| || || || ||||| || | ||| ||| Sbjct 710889 TCGAGCTTGAGGAGGTATGATCGCTCCAGCGTCTTGAAGCCAAAGTATTGGTAGTTGAAG 710948 Query 77204 TCTCTTTCGTA 77214 |||| ||||| Sbjct 710949 TCTCGGTCGTA 710959 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934284148160