Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09] 13 sequences; 32,322,684 total letters Query= NC_031058.1 Length=58566 Score E Sequences producing significant alignments: (Bits) Value seq7 89.7 2e-13 >seq7 Length=2761852 Score = 89.7 bits (98), Expect = 2e-13 Identities = 164/236 (69%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 31005 CCATGCACATGTGTCGCGCCTTAATGACCACACCGACGCCCTTGGCTTCCAGGTGCTCGA 31064 ||||||||| ||| | | || |||||||| ||||||||| || |||| |||| Sbjct 51433 CCATGCACAGGTGGCTGGACTCTATGACCACGGCGACGCCCTGGGGCCGCAGGACGTCGA 51374 Query 31065 ACAGTGCGTCCGCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCGGCGAGCATACA 31124 | | |||| ||||| | | || || || ||||| | ||||||||||| | ||| Sbjct 51373 AGATGGCGTTGGCGATTTCTTTCGTAAGGCGCTCCTGGATCTGCAGGCGGCGGGAGAACA 51314 Query 31125 TGTCCGCCAGGCGGGACAGCTTGCTCAGGCCCACGATACGAC--CGTTCGGAATGTAGCT 31182 |||| || | ||| | ||||||| | ||| | | ||| | ||| || ||||||| Sbjct 51313 TGTCGGCAATGCGCGGCAGCTTGGAGATGCCGATG--ACGGCGTTGTTGGGGATGTAGCC 51256 Query 31183 GATCGTG-ACCGTGCCGAAGATCGGCGCGAGGTGATGCTCGCAATGTGAGTAGATG 31237 ||| ||| ||| ||||| || || | ||||| |||||||| | ||| ||||| Sbjct 51255 GAT-GTGCACCTTGCCGGTGAAGGGTACCAGGTGGTGCTCGCAGAGGGAGAAGATG 51201 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 187289571087168