Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20koningii_20[genbank_20GCA_5F001950475.1_202016-12-09]
13 sequences; 32,322,684 total letters
Query= NC_031058.1
Length=58566
Score E
Sequences producing significant alignments: (Bits) Value
seq7 89.7 2e-13
>seq7
Length=2761852
Score = 89.7 bits (98), Expect = 2e-13
Identities = 164/236 (69%), Gaps = 6/236 (3%)
Strand=Plus/Minus
Query 31005 CCATGCACATGTGTCGCGCCTTAATGACCACACCGACGCCCTTGGCTTCCAGGTGCTCGA 31064
||||||||| ||| | | || |||||||| ||||||||| || |||| ||||
Sbjct 51433 CCATGCACAGGTGGCTGGACTCTATGACCACGGCGACGCCCTGGGGCCGCAGGACGTCGA 51374
Query 31065 ACAGTGCGTCCGCGATCTGGTCTGTGAGCCGTTCCTGCACTTGCAGGCGGCGAGCATACA 31124
| | |||| ||||| | | || || || ||||| | ||||||||||| | |||
Sbjct 51373 AGATGGCGTTGGCGATTTCTTTCGTAAGGCGCTCCTGGATCTGCAGGCGGCGGGAGAACA 51314
Query 31125 TGTCCGCCAGGCGGGACAGCTTGCTCAGGCCCACGATACGAC--CGTTCGGAATGTAGCT 31182
|||| || | ||| | ||||||| | ||| | | ||| | ||| || |||||||
Sbjct 51313 TGTCGGCAATGCGCGGCAGCTTGGAGATGCCGATG--ACGGCGTTGTTGGGGATGTAGCC 51256
Query 31183 GATCGTG-ACCGTGCCGAAGATCGGCGCGAGGTGATGCTCGCAATGTGAGTAGATG 31237
||| ||| ||| ||||| || || | ||||| |||||||| | ||| |||||
Sbjct 51255 GAT-GTGCACCTTGCCGGTGAAGGGTACCAGGTGGTGCTCGCAGAGGGAGAAGATG 51201
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 187289571087168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |