Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq804 129 1e-24
>seq804
Length=175399
Score = 129 bits (142), Expect = 1e-24
Identities = 322/477 (68%), Gaps = 14/477 (3%)
Strand=Plus/Minus
Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCG-GGAG 230228
|| |||||| |||||||||| |||| | ||| || ||||| || | ||| | || |
Sbjct 35308 TCCTTTGCCCAGCGTCTCGTTGCCTTTGCCGCTGTCGAGGGTAT-CT-TCTTCAGCGGTG 35251
Query 230229 TTTCTGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 230287
| ||| |||| || ||||| ||| |||| | ||||| ||||| | || |
Sbjct 35250 CCTTTGCCTCCATTTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTGACCTTTTCCA 35191
Query 230288 ACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAA 230347
||||| ||||| ||| ||||||||||| || | || | | || || | ||
Sbjct 35190 ACGAGCTCATCTCTCGTGACGAGGGTCTGCACACGGACTTTGCCTGCCTGCTGCACTCTC 35131
Query 230348 AGCTCCAGAACAAGCTACCATTCGAGACGGTCAAAC---AAATCATTACAGAAGCAGTTG 230404
| || ||||| || ||| | || ||| | | | ||||| || || || ||
Sbjct 35130 ACCTGAAGAACC-GCG-CCAG-CAAGGAGGTGATTCGTGACATCATCACCGACGCCGTCC 35074
Query 230405 AAAACGAAAAGGAGTTCATTTGT--GACGCTATTCCATGTCGCCTTATTGGCATGAACGC 230462
| ||| ||||||| |||| || ||| | || || ||| | ||||||||| |
Sbjct 35073 GCATCGAGCAGGAGTT--TTTGACCGAAGCTCTGCCTTGCGCCCTGCTGGGCATGAACTC 35016
Query 230463 TGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTA 230522
| || ||| |||||||| || || || ||||||||| | | || || || || |
Sbjct 35015 CAACCTCATGAAGCAGTACATTGAGTTTGTCGCCGACCGCCTGCTGGTAGCTCTCGGCAA 34956
Query 230523 CGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGG 230582
|||||| |||||||| || |||||||||| ||||||||| |||||| || ||
Sbjct 34955 CGAGAAGGTGTACAAGTCGTCCAACCCCTTTGACTTTATGGAGAACATTTCCCTGGGCGG 34896
Query 230583 GAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATGAA 230639
|||||||||||||| || ||||| ||| ||||| |||| | | ||||| |||||
Sbjct 34895 CAAGACCAACTTCTTTGAGAAGCGCGTCGCCGACTACCAGAAGGCCGGTGTCATGAA 34839
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057812005267550
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |