Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq804 129 1e-24 >seq804 Length=175399 Score = 129 bits (142), Expect = 1e-24 Identities = 322/477 (68%), Gaps = 14/477 (3%) Strand=Plus/Minus Query 230170 TCGTTTGCCGAGCGTCTCGTCGCCTGGGTGTGTGTTGAAGGTATTCTGTTTTCCG-GGAG 230228 || |||||| |||||||||| |||| | ||| || ||||| || | ||| | || | Sbjct 35308 TCCTTTGCCCAGCGTCTCGTTGCCTTTGCCGCTGTCGAGGGTAT-CT-TCTTCAGCGGTG 35251 Query 230229 TTTCTGCG-CCATCTTTTGGCTGCGGAACAAAGGTGTGATGCCTGGCCTCGGTCTGTCTA 230287 | ||| |||| || ||||| ||| |||| | ||||| ||||| | || | Sbjct 35250 CCTTTGCCTCCATTTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTGACCTTTTCCA 35191 Query 230288 ACGAGTTCATCAGTCGCGACGAGGGTCTCCATCAACAGTTCGGCGAGCTTATGTATTCAA 230347 ||||| ||||| ||| ||||||||||| || | || | | || || | || Sbjct 35190 ACGAGCTCATCTCTCGTGACGAGGGTCTGCACACGGACTTTGCCTGCCTGCTGCACTCTC 35131 Query 230348 AGCTCCAGAACAAGCTACCATTCGAGACGGTCAAAC---AAATCATTACAGAAGCAGTTG 230404 | || ||||| || ||| | || ||| | | | ||||| || || || || Sbjct 35130 ACCTGAAGAACC-GCG-CCAG-CAAGGAGGTGATTCGTGACATCATCACCGACGCCGTCC 35074 Query 230405 AAAACGAAAAGGAGTTCATTTGT--GACGCTATTCCATGTCGCCTTATTGGCATGAACGC 230462 | ||| ||||||| |||| || ||| | || || ||| | ||||||||| | Sbjct 35073 GCATCGAGCAGGAGTT--TTTGACCGAAGCTCTGCCTTGCGCCCTGCTGGGCATGAACTC 35016 Query 230463 TGAACTTATGGGACAGTACATCGAATTCGTAGCCGACCGCATTTTTGTTGCACTTGGTTA 230522 | || ||| |||||||| || || || ||||||||| | | || || || || | Sbjct 35015 CAACCTCATGAAGCAGTACATTGAGTTTGTCGCCGACCGCCTGCTGGTAGCTCTCGGCAA 34956 Query 230523 CGAGAAAGTGTACAACTCTAAGAACCCCTTTGCATTTATGGAGCTCATTTCGCTTCAAGG 230582 |||||| |||||||| || |||||||||| ||||||||| |||||| || || Sbjct 34955 CGAGAAGGTGTACAAGTCGTCCAACCCCTTTGACTTTATGGAGAACATTTCCCTGGGCGG 34896 Query 230583 GAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACTATCAGAGGCCTGGTGTGATGAA 230639 |||||||||||||| || ||||| ||| ||||| |||| | | ||||| ||||| Sbjct 34895 CAAGACCAACTTCTTTGAGAAGCGCGTCGCCGACTACCAGAAGGCCGGTGTCATGAA 34839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057812005267550