Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq804 147 2e-30
>seq804
Length=175399
Score = 147 bits (162), Expect = 2e-30
Identities = 362/544 (67%), Gaps = 19/544 (3%)
Strand=Plus/Plus
Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044
|||||||| | ||| || ||||| ||||| |||| |||||||| ||||| |||
Sbjct 35166 CCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACCTCGCTTC 35225
Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104
|| | ||| || || | ||| || | || ||||| ||||||||||| | |||||
Sbjct 35226 TTGAGCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACAGCGGCAAAG 35285
Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCG 17164
|| | | || | ||| | | || || |||| | |||||| | |||| ||
Sbjct 35286 GCAACGAGACGCTGGGCAAAGGACGAGTTCTTGTCCTGGATCCATCGAATCGCCCAGTCA 35345
Query 17165 GCTTT-TTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA----TAATTTCTCTTTTT 17219
|| || |||| |||||| || || || ||||| || || || || | ||
Sbjct 35346 GCCTTCTTGCGA-ATGCAAGGAATGGTCTCAATGGCGTTGAAGAGGTAGTTGCGCTGG-- 35402
Query 17220 CCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCT 17279
|||| | || | ||||| || |||||||| ||| |||| | |||||||| |||||||
Sbjct 35403 -CTGT-GCTCCTTGATATAAGTGTCGATGAGCAGGGAGTACGTCTCGGAGTGGATGTTCT 35460
Query 17280 CCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGA 17339
|||| ||||| || ||||||||||| || || || | || || || || || ||
Sbjct 35461 CCATCATGATCTGGAAGCCGTAAAAGCAGCGAGCCTCGGGGATCTGGACCTCGCCGCTGA 35520
Query 17340 ATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATAT 17399
| || || | || || ||||| || |||||||| |||||||| || |||| || |
Sbjct 35521 AGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGGCGGCGAAGAAGGCCAGGATGT 35580
Query 17400 GCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCG------CCAGTCCTTTAAATCTT 17453
| ||||| || || ||||| | || ||| |||||| | | || |
Sbjct 35581 GAGAGATGAAGTACTTCTCGTCATCGTTCAG---GCGGTTGTTCCAGTCGTGCAGGTCCT 35637
Query 17454 TGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCC 17513
|||| | || | || |||| |||||| || |||| | |||||||| ||||| | ||
Sbjct 35638 TGGACAGGTCAATCTCCTCGGCGGTCCAGAAGGAAGCCTCGGCCTTTTTGTACATTTGCC 35697
Query 17514 AAAT 17517
| ||
Sbjct 35698 AGAT 35701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517539874651800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |