Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq804 147 2e-30 >seq804 Length=175399 Score = 147 bits (162), Expect = 2e-30 Identities = 362/544 (67%), Gaps = 19/544 (3%) Strand=Plus/Plus Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044 |||||||| | ||| || ||||| ||||| |||| |||||||| ||||| ||| Sbjct 35166 CCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACCTCGCTTC 35225 Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104 || | ||| || || | ||| || | || ||||| ||||||||||| | ||||| Sbjct 35226 TTGAGCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACAGCGGCAAAG 35285 Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCG 17164 || | | || | ||| | | || || |||| | |||||| | |||| || Sbjct 35286 GCAACGAGACGCTGGGCAAAGGACGAGTTCTTGTCCTGGATCCATCGAATCGCCCAGTCA 35345 Query 17165 GCTTT-TTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAA----TAATTTCTCTTTTT 17219 || || |||| |||||| || || || ||||| || || || || | || Sbjct 35346 GCCTTCTTGCGA-ATGCAAGGAATGGTCTCAATGGCGTTGAAGAGGTAGTTGCGCTGG-- 35402 Query 17220 CCTGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCT 17279 |||| | || | ||||| || |||||||| ||| |||| | |||||||| ||||||| Sbjct 35403 -CTGT-GCTCCTTGATATAAGTGTCGATGAGCAGGGAGTACGTCTCGGAGTGGATGTTCT 35460 Query 17280 CCATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGA 17339 |||| ||||| || ||||||||||| || || || | || || || || || || Sbjct 35461 CCATCATGATCTGGAAGCCGTAAAAGCAGCGAGCCTCGGGGATCTGGACCTCGCCGCTGA 35520 Query 17340 ATCGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATAT 17399 | || || | || || ||||| || |||||||| |||||||| || |||| || | Sbjct 35521 AGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGGCGGCGAAGAAGGCCAGGATGT 35580 Query 17400 GCTTAATGAAATATTTTTCGTCCGGTGTAAGAACGCG------CCAGTCCTTTAAATCTT 17453 | ||||| || || ||||| | || ||| |||||| | | || | Sbjct 35581 GAGAGATGAAGTACTTCTCGTCATCGTTCAG---GCGGTTGTTCCAGTCGTGCAGGTCCT 35637 Query 17454 TGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCC 17513 |||| | || | || |||| |||||| || |||| | |||||||| ||||| | || Sbjct 35638 TGGACAGGTCAATCTCCTCGGCGGTCCAGAAGGAAGCCTCGGCCTTTTTGTACATTTGCC 35697 Query 17514 AAAT 17517 | || Sbjct 35698 AGAT 35701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517539874651800