Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_001650.2
Length=184439
Score E
Sequences producing significant alignments: (Bits) Value
seq371 255 7e-63
>seq371
Length=49181
Score = 255 bits (282), Expect = 7e-63
Identities = 536/804 (67%), Gaps = 80/804 (10%)
Strand=Plus/Plus
Query 145531 CCCAATTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCA 145590
||| ||||||| | ||| | |||||| || | | |||||||| ||| |||| | |
Sbjct 9161 CCCGATTAGACGGACATGTTCATGGGAATCGACTTGTGGGGGTCGTATCCCTTGACGATA 9220
Query 145591 AAGTCCTCCGCCCTGAAGTCATCTATGTCCTCCACCCGCCTCAGG----ATCCTGAGCCT 145646
|||||||| || | || | || ||| | || ||| || | ||| |||
Sbjct 9221 AAGTCCTCGACCTTCCAGCCGTCGATG-CTGCCGCCCTTTTCCCGCGCAATCTCCAGCTC 9279
Query 145647 GGGAAAGGGCCGGGGGCTCCTGGTC-AGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGT 145705
||| || ||||| || ||| | || ||||| || ||||| ||| | ||||| || ||
Sbjct 9280 GGGGAACGGCCGCGG-CTCGCGCTCGAGCTGTGTCTGCAGGGCCTCGATGTGGTCGATGT 9338
Query 145706 AGACGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCCGTGAGGTGGG 145765
||||||||||||| |||| ||||||| ||| | ||| ||| | || | | |||||
Sbjct 9339 AGACGTGCGCGTCTCCCATGACGTGGGTGAGGCTCCCCGGCACCAGATCGCACACGTGGG 9398
Query 145766 CGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGT 145825
||| ||||| || ||||| | |||||| || ||||||||||| | || ||||||||||
Sbjct 9399 CGAGCATGTGCGTGAGCAGCGCGTAGCTCGCAATGTTGAAGGGGATGCCGAGCCCCATGT 9458
Query 145826 CCCCCGAGCGCTGGTACAGCTGGCAG------------------------------GAGA 145855
| | || |||||||||||||||||| |||
Sbjct 9459 CGCAGGACCGCTGGTACAGCTGGCAGTGGAGGTGACCCTTTGGCTTGTTCTCCTCCGAGG 9518
Query 145856 GCTCC------------CCGC-----CCGCC----------ACGTAGAACTGGCACAGGA 145888
||||| |||| | ||| |||||||||||| | |
Sbjct 9519 GCTCCGGGGCGTCGACGCCGCGGCCGCGGCCCGGGTACGAGACGTAGAACTGGGCGAACA 9578
Query 145889 GGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGA 145948
|||||||||||| |||||||| | ||| ||||||||| ||| |||| | |
Sbjct 9579 TGTGGCAGGGCGGGAGGGCCATTTTCTTAAAGTCGCGCGGGTTCCACGCGCTGAGTATCA 9638
Query 145949 GCCTCCTGCTCTCGGGGTTCCT------CTTGATCTCCCCTATCAGGTCCCTGAGCTGGT 146002
|| |||| | |||||| | |||| | | ||| | || |||||||
Sbjct 9639 TCCGCCTGTCATACGGGTTCGTGCGCAGCTTG---TGGACGATCTCGGCC---AGCTGGT 9692
Query 146003 CCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCC 146062
| ||||||| || ||| || || |||| ||| |||||| |||| || ||||||| ||
Sbjct 9693 CGACGCCCTTGCCGGCGTAGTCGGTGTTGGCGTCGACGTACTCGGCGCCAAAGTGCCGCC 9752
Query 146063 ACTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGG 146122
||||||| ||||||||||| |||||||| ||| || | |||| |||| ||| | | |
Sbjct 9753 ACTGGAAGCCGTAGACGGGGCCCAGGTCGCCGACGTCGCGGTGCGCCAGGCCGACGCTGT 9812
Query 146123 CGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCC--CCTCGCGGAGAGCTC 146180
||||||| || ||||| |||||| ||||||||||||||||||| | |||| ||| | |
Sbjct 9813 CGAGGAACTCGCGGGAGCCGTTGCCGTCCCAGATCTTGACGCCGACGTCGCTGAGGG--C 9870
Query 146181 ATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAA 146240
||||| ||| ||| |||||||||||| ||||| ||| ||| | | |||
Sbjct 9871 CTTGGATGAGGTGTTGCCCTCGATGAACCAGAGGAGCTCGGCGATGACGGCGCGGAGGAA 9930
Query 146241 GACCCTCTTGGTGGTCAGCAGGGG 146264
||| | ||| ||||| || |||||
Sbjct 9931 GACGCGCTTCGTGGTGAGGAGGGG 9954
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 590070272275400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |