Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_001875.2
Length=131995
Score E
Sequences producing significant alignments: (Bits) Value
seq373 107 2e-18
>seq373
Length=44988
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 20949 CCCCCTCGCAGCCTGAGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCC 21008
|| || || || | ||| |||| || | || |||||||| || ||||| ||||| |
Sbjct 36085 CCACCACGAAGGCGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 36026
Query 21009 AGGGTTTGGGCGTCCTCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGC 21068
|||||| || ||||||| ||||| ||||| ||| | || || | |||||||||| ||
Sbjct 36025 AGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGG 35966
Query 21069 ACGCCTTCCTTGTCGGCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTT 21128
| || |||||||| |||||| ||||| | | ||| || || | |||
Sbjct 35965 ATACCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCGACC 35906
Query 21129 TCCACGGTAATGGTCTTGCCGGTTAACGTTTTGACAAATATTTGCAT 21175
|| | ||| |||||||||||||| | || ||||| || || |||||
Sbjct 35905 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCAT 35859
Score = 91.5 bits (100), Expect = 1e-13
Identities = 131/185 (71%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 20979 GTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCCTCCAGCTGTTTGCCC 21038
|| |||||||| || ||||| ||||| | |||||| || ||||||| ||||| |||||
Sbjct 36341 GTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCAAGCTGCTTGCCA 36282
Query 21039 GCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCGGCGATCTTTTGTTTC 21098
||| | || || | |||||||||| || | || |||||||| |||||| ||
Sbjct 36281 GCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 36222
Query 21099 ACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTCTTGCCGGTTAACGTT 21158
|| | | ||| || ||| || ||| || | || || ||||||||||| | ||
Sbjct 36221 ACGTTGTCGATGGTGTCAGAGGACTCAACCTCGAGAGTGATCGTCTTGCCGGTCAGGGTC 36162
Query 21159 TTGAC 21163
|||||
Sbjct 36161 TTGAC 36157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 422254645538660
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |