Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq804 152 1e-31
seq736 113 9e-20
>seq804
Length=175399
Score = 152 bits (168), Expect = 1e-31
Identities = 300/440 (68%), Gaps = 9/440 (2%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||||||||| || || || || |||||||| || ||||| || || ||||||||||||
Sbjct 35290 GTTGCCTTTGCCGCTGTCGAGGGTATCTTCTTCAGCGGTGCCTTTGCCTCCATTTTCTGG 35231
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
||||||| | ||| | |||| || || |||| ||||| ||| |||| ||| | |||
Sbjct 35230 CTCAAGAAGCGAGGTCTCATGCCCGGCCTGACCTTTTCCAACGAGCTCATCTCTCGTGAC 35171
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACC--- 102094
|| ||||| || |||||||| ||| ||||| | || || |||
Sbjct 35170 GAGGGTCTGCACACGGACTTTGCCTGCCTGCTG----CACTCTCACCTGAAGA-ACCGCG 35116
Query 102095 CCATCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTT 102154
||| |||| || ||||| ||| || |||| || |||||||| || || || || |||
Sbjct 35115 CCAGCAAG-GAGGTGATTCGTGACATCATCACCGACGCCGTCCGCATCGAGCAGGAGTTT 35057
Query 102155 CTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTAC 102214
| || | | |||||| | |||| ||||||| ||| | |||| ||||||
Sbjct 35056 TTGACCGAAGCTCTGCCTTGCGCCCTGCTGGGCATGAACTCCAACCTCATGAAGCAGTAC 34997
Query 102215 ATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGGACTAGAAAAGCACTATAATGTT 102274
||||| ||||| || || || |||| | | || || ||| || ||
Sbjct 34996 ATTGAGTTTGTCGCCGACCGCCTGCTGGTAGCTCTCGGCAACGAGAAGGTGTACAAGTCG 34937
Query 102275 ACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTTGAA 102334
|||||||||| || ||||| || |||||||| | ||||||||||| |||||
Sbjct 34936 TCCAACCCCTTTGACTTTATGGAGAACATTTCCCTGGGCGGCAAGACCAACTTCTTTGAG 34877
Query 102335 AAGAGAGTCGCCGAGTATCA 102354
||| | |||||||| || ||
Sbjct 34876 AAGCGCGTCGCCGACTACCA 34857
>seq736
Length=134049
Score = 113 bits (124), Expect = 9e-20
Identities = 179/257 (70%), Gaps = 0/257 (0%)
Strand=Plus/Minus
Query 94786 CCGAGTCCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCC 94845
|||| || ||||| ||||||| || || || | ||| || || ||||| ||||||
Sbjct 46855 CCGATGCCACCAGCCATCTTGGAAATCATGGCACACGTCTTCAGGGTGTCATAGATACCC 46796
Query 94846 TCAATGCTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGGTGTGACTGTT 94905
|||||||| || || | | | ||| |||||||| ||||| || |||| | ||
Sbjct 46795 TCAATGCTGTCGTCCTTCATGTCCACCAGGAAGCATGAGGACAGCTGGGCTTGCGGGGTG 46736
Query 94906 CCACAATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATAT 94965
||| ||| || || || ||||| || ||||| || | | || |||||||| | |||
Sbjct 46735 CCAGCATTGAAGAGGGTAGGGGAGGCGTGGGTGAAGAACTTGCTGGACATGAGGTGGTAT 46676
Query 94966 GTTTCAATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCATAATCATG 95025
|| || | |||| | ||||| ||| ||||| || ||||| ||||||||||||
Sbjct 46675 GTCTCGAGGACACGCTCAATGTCGTCTCCCCAGATGCCAACGGCCACTCGCATAATCATG 46616
Query 95026 TCCTGAGGGCGCTCAAC 95042
| || || ||||| ||
Sbjct 46615 TGTTGTGGCCGCTCGAC 46599
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989572779045175
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |