Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq371 100 2e-16 >seq371 Length=49181 Score = 100 bits (110), Expect = 2e-16 Identities = 156/221 (71%), Gaps = 8/221 (4%) Strand=Plus/Plus Query 20876 AATCTTCAGCCGCGGAAACGGACGCGGGGTCCTC-CGC---AGCTGAAGCAGCAGGGGAT 20931 ||||| |||| || ||||| ||||| ||| ||| ||||| | |||||| | Sbjct 9268 AATCTCCAGCTCGGGGAACGGCCGCGG----CTCGCGCTCGAGCTGTGTCTGCAGGGCCT 9323 Query 20932 CAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCA 20991 | | ||||| | |||| ||||| ||||| |||| | ||| | | ||||| || Sbjct 9324 CGATGTGGTCGATGTAGACGTGCGCGTCTCCCATGACGTGGGTGAGGCTCCCCGGCACCA 9383 Query 20992 GGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGA 21051 | | ||||| |||| || | ||| || || |||||||| || ||||| || |||| Sbjct 9384 GATCGCACACGTGGGCGAGCATGTGCGTGAGCAGCGCGTAGCTCGCAATGTTGAAGGGGA 9443 Query 21052 CCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAG 21092 ||||| ||||||||| ||||| |||||||||||||||| Sbjct 9444 TGCCGAGCCCCATGTCGCAGGACCGCTGGTACAGCTGGCAG 9484 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427771386034800