Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq877 93.3 4e-14
seq373 86.0 6e-12
>seq877
Length=50207
Score = 93.3 bits (102), Expect = 4e-14
Identities = 138/193 (72%), Gaps = 2/193 (1%)
Strand=Plus/Minus
Query 139573 CTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATA 139632
||| || || ||||| || ||||||| |||| || |||||||| || || ||| |
Sbjct 31665 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAA 31606
Query 139633 GATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTG 139692
|||||| || ||||| || || || ||||| || ||||| ||| | || | || |
Sbjct 31605 GATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCC-TGAATCTTGGACTTGACGT 31547
Query 139693 T-TCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTA 139751
| || | ||||||| | ||||||||||| ||| | |||||| || || | || || |
Sbjct 31546 TGTCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGA 31487
Query 139752 CGAATATTTGCAT 139764
|||| || |||||
Sbjct 31486 CGAAAATCTGCAT 31474
>seq373
Length=44988
Score = 86.0 bits (94), Expect = 6e-12
Identities = 145/210 (69%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 139555 AACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTC 139614
||| | ||| | |||||||| || || ||||| || ||| | || | ||| ||
Sbjct 36068 AACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTC 36009
Query 139615 GAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGT 139674
||||| || |||||| |||| ||||| ||||| || ||||| || || || |||||
Sbjct 36008 AAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTG 35949
Query 139675 GATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTT 139734
||| || || | | || | ||||||| | ||| ||||| | ||| | |||||
Sbjct 35948 GATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTT 35889
Query 139735 GCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|||||| | || || ||||| || |||||
Sbjct 35888 GCCGGTGAGGGTCTTGACGAAGATCTGCAT 35859
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496058512292000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |