Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq804 140 5e-28 >seq804 Length=175399 Score = 140 bits (154), Expect = 5e-28 Identities = 362/546 (66%), Gaps = 12/546 (2%) Strand=Plus/Plus Query 49974 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 50033 ||||||||||||||| | | || || ||||||||||| || || |||||||| || || Sbjct 35159 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACC 35218 Query 50034 ACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGC 50093 ||||| || ||||| || ||||| ||||| | || |||||||| || || || || Sbjct 35219 TCGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACAGC 35278 Query 50094 GGCAAAGGCAACAAGTCTCTCTCCATA--ACTGGCGC-TGTCATGTATCCACTTTTGA-- 50148 |||||||||||| || | || || | || | | |||| || ||||| | || Sbjct 35279 GGCAAAGGCAACGAGACGCTGGGCAAAGGACGAGTTCTTGTCCTGGATCCA---TCGAAT 35335 Query 50149 -GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtt 50207 ||||| || |||||||| | ||||| || || || ||||| || ||||| ||||| Sbjct 35336 CGCCCAGTCAGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAAGAGGTAGTT 35395 Query 50208 tttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAAT 50267 | | || || | |||||| ||||| | || ||| | || || || || Sbjct 35396 GCGCTGGCTGTGCTCCTTGATATAAGTGTCGATGAGCAGGGAGTACGTCTCGGAGTGGAT 35455 Query 50268 GTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGT 50327 ||| || || ||||| || ||||| || || | |||||||| ||||| || || Sbjct 35456 GTTCTCCATCATGATCTGGAAGCCGTAAAAGCAGCGAGCCTCGGGGATCTGGACCTCGCC 35515 Query 50328 ACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 50387 | || || || | | || || || || || ||||| ||| || || || |||| Sbjct 35516 GCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGGCGGCGAAGAAGGCCAG 35575 Query 50388 TACATGTTTTATAAAATGTTTTTCGT--TGGGT-GTTAGTTTATTCCAATCATTGATATC 50444 | || || || | || |||| | | | | || ||||| || | | || Sbjct 35576 GATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAGTCGTGCAGGTC 35635 Query 50445 TTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATT 50504 || || | || | || || | ||||| || || ||||| |||||||| ||||| | Sbjct 35636 CTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAGGAAGCCTCGGCCTTTTTGTACATTTG 35695 Query 50505 CCAGAT 50510 |||||| Sbjct 35696 CCAGAT 35701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718260854151400