Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq804 140 5e-28
>seq804
Length=175399
Score = 140 bits (154), Expect = 5e-28
Identities = 362/546 (66%), Gaps = 12/546 (2%)
Strand=Plus/Plus
Query 49974 GTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 50033
||||||||||||||| | | || || ||||||||||| || || |||||||| || ||
Sbjct 35159 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACC 35218
Query 50034 ACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGAAGATTCCTTCTACTGC 50093
||||| || ||||| || ||||| ||||| | || |||||||| || || || ||
Sbjct 35219 TCGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACAGC 35278
Query 50094 GGCAAAGGCAACAAGTCTCTCTCCATA--ACTGGCGC-TGTCATGTATCCACTTTTGA-- 50148
|||||||||||| || | || || | || | | |||| || ||||| | ||
Sbjct 35279 GGCAAAGGCAACGAGACGCTGGGCAAAGGACGAGTTCTTGTCCTGGATCCA---TCGAAT 35335
Query 50149 -GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtt 50207
||||| || |||||||| | ||||| || || || ||||| || ||||| |||||
Sbjct 35336 CGCCCAGTCAGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAAGAGGTAGTT 35395
Query 50208 tttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACATTTCCGAATGAAT 50267
| | || || | |||||| ||||| | || ||| | || || || ||
Sbjct 35396 GCGCTGGCTGTGCTCCTTGATATAAGTGTCGATGAGCAGGGAGTACGTCTCGGAGTGGAT 35455
Query 50268 GTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAATCTGCACTTCTGT 50327
||| || || ||||| || ||||| || || | |||||||| ||||| || ||
Sbjct 35456 GTTCTCCATCATGATCTGGAAGCCGTAAAAGCAGCGAGCCTCGGGGATCTGGACCTCGCC 35515
Query 50328 ACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 50387
| || || || | | || || || || || ||||| ||| || || || ||||
Sbjct 35516 GCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGGCGGCGAAGAAGGCCAG 35575
Query 50388 TACATGTTTTATAAAATGTTTTTCGT--TGGGT-GTTAGTTTATTCCAATCATTGATATC 50444
| || || || | || |||| | | | | || ||||| || | | ||
Sbjct 35576 GATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTCCAGTCGTGCAGGTC 35635
Query 50445 TTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATT 50504
|| || | || | || || | ||||| || || ||||| |||||||| ||||| |
Sbjct 35636 CTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAGGAAGCCTCGGCCTTTTTGTACATTTG 35695
Query 50505 CCAGAT 50510
||||||
Sbjct 35696 CCAGAT 35701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718260854151400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |