Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq804 111 2e-19
>seq804
Length=175399
Score = 111 bits (122), Expect = 2e-19
Identities = 356/547 (65%), Gaps = 14/547 (3%)
Strand=Plus/Plus
Query 42079 GTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCC 42138
|||||||||||| || | | || | ||||||||||| || || |||||||| || ||
Sbjct 35159 GTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACC 35218
Query 42139 ACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGC 42198
||||| || ||||| || || || ||||| | || |||||||| || || || ||
Sbjct 35219 TCGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACAGC 35278
Query 42199 CGCAAAGGCAATAAGTCTCTCTCCATA--ACCGGCAC-TGTCATGTATCCACTTTTGA-- 42253
|||||||||| || | || || | || | | |||| || ||||| | ||
Sbjct 35279 GGCAAAGGCAACGAGACGCTGGGCAAAGGACGAGTTCTTGTCCTGGATCCA---TCGAAT 35335
Query 42254 -GCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATAGtt 42312
||||| || |||||||| | ||||| || || || ||||| || ||||| |||||
Sbjct 35336 CGCCCAGTCAGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAAGAGGTAGTT 35395
Query 42313 tttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATGAAT 42372
| | || || | ||| || ||||| | || ||| | || || || ||
Sbjct 35396 GCGCTGGCTGTGCTCCTTGATATAAGTGTCGATGAGCAGGGAGTACGTCTCGGAGTGGAT 35455
Query 42373 GTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTTCTGT 42432
||| || || ||||| || ||||| || || | ||||||| | ||| || ||
Sbjct 35456 GTTCTCCATCATGATCTGGAAGCCGTAAAAGCAGCGAGCCTCGGGGATCTGGACCTCGCC 35515
Query 42433 ACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAACGCCAA 42492
| || || || | | || ||||| || || ||||| ||| || || || ||||
Sbjct 35516 GCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGGCGGCGAAGAAGGCCAG 35575
Query 42493 TACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA----TTTATTCCAATCATTGATAT 42548
| || || || || || |||| | ||| | || ||||| || | | |
Sbjct 35576 GATGTGAGAGATGAAGTACTTCTCGT-CATCGTTCAGGCGGTTGTTCCAGTCGTGCAGGT 35634
Query 42549 CTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATACATAT 42608
| || || | || | || || | ||||| || || || || |||||||| ||||| |
Sbjct 35635 CCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAGGAAGCCTCGGCCTTTTTGTACATTT 35694
Query 42609 TCCAGAT 42615
||||||
Sbjct 35695 GCCAGAT 35701
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671131775522600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |