Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_005337.1 Length=134431 Score E Sequences producing significant alignments: (Bits) Value seq680 118 9e-22 >seq680 Length=10786 Score = 118 bits (130), Expect = 9e-22 Identities = 122/160 (76%), Gaps = 0/160 (0%) Strand=Plus/Minus Query 5594 AGCTGCGCTATTCGGTCGCCCGTCTTTACCTCGAAATCGTTGTGGCCGAAGTTGAACAGC 5653 |||||||| || || |||||| ||| | |||| | ||| || || ||||||||| Sbjct 4286 AGCTGCGCGATCCGATCGCCCTCCTTGATCTCGTAGTCGGCGTCCGCGTGGTTGAACAGG 4227 Query 5654 ACCACGCCCACGTTGCCGCGGTAGTCGGCGTCTATCACGCCCGCGCCCACGTCGATGAAG 5713 | || ||| |||||||||||||||||| || ||||||||||| |||||||||| Sbjct 4226 AGGACCTTGACGGGGCCGCGGTAGTCGGCGTCGATGACGCCCGCGCCGGTGTCGATGAAG 4167 Query 5714 TGCTTGACCGCCAGGCCGGAGCGGGGAGCCACGCGGCCGT 5753 |||||| || || || ||||||||||| | |||||||| Sbjct 4166 TGCTTGGAGGCGAGACCCGAGCGGGGAGCAATGCGGCCGT 4127 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 430049761460120