Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq510 82.4 5e-11 >seq510 Length=17648 Score = 82.4 bits (90), Expect = 5e-11 Identities = 108/145 (74%), Gaps = 6/145 (4%) Strand=Plus/Minus Query 44403 AGATGGGCGACAAGTTTGCGTCGT-TCACGGCGCAAAAGGGGACATGCGGAGCCGTCCTG 44461 |||| || |||||||||||||| |||||| |||||||| || || | | || Sbjct 13825 AGATTGGTGACAAGTTTGCGTCTCGTCACGGA-CAAAAGGGCACTATTGGTGTCA--CTT 13769 Query 44462 ACC--CAGGAGGACATGCCCTTCGACAAAAACGGGGTGGTGCCCGACCTCATCATCAACC 44519 ||| |||||||||||||| ||| || | | || | ||||||| |||||||||||| Sbjct 13768 ACCGGCAGGAGGACATGCCGTTCACCAGAGAGGGAATTACGCCCGACATCATCATCAACC 13709 Query 44520 CCCACGCCTTTCCCTCCAGGATGAC 44544 |||||||| |||| || | ||||| Sbjct 13708 CCCACGCCATTCCGTCTCGTATGAC 13684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340133931297105