Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq373 98.7 8e-16
seq877 93.3 4e-14
>seq373
Length=44988
Score = 98.7 bits (108), Expect = 8e-16
Identities = 147/209 (70%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 48518 ACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCC 48577
|| || || || ||||||||||| || |||||||| || ||| || |||| |||
Sbjct 36581 ACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGGCCGTCTTCC 36522
Query 48578 AGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATA 48637
||||||||||| || |||| | |||||||| ||| || | || ||||||||| |
Sbjct 36521 AGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGA 36462
Query 48638 ATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTA 48697
|| || ||||| | || ||||| | ||||| ||| | || ||||| ||
Sbjct 36461 ATCTTGGACTTGACGTTGTCAATAGTATCAGATGACTCGACCTCCAGGGTGATGGTCTTT 36402
Query 48698 CCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|| ||||| || || || |||||||||||
Sbjct 36401 CCTGTGAGGGTCTTGACGAAAATCTGCAT 36373
Score = 95.1 bits (104), Expect = 1e-14
Identities = 145/205 (71%), Gaps = 4/205 (2%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTCGTCCTCCAGCTGC 48583
|| || ||||||||||| || |||||||| || ||| || |||| |||||||||
Sbjct 36803 TGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGACCGTCTTCCAGCTGC 36744
Query 48584 TTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTTC 48643
||||| | | || || |||||||| || ||| | || ||||||||| ||| |||
Sbjct 36743 TTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTCCTGAATCTTC 36684
Query 48644 TGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCGG 48701
||||| | | || |||||||| | || ||| || | || || || ||||| |
Sbjct 36683 GACTTGACGTTGTCG--ATGGTATCAGATGATTCCACTTCCAGAGTAATCGTCTTACCCG 36626
Query 48702 TGAGAGTTTTCACAAAAATCTGCAT 48726
| || || || ||||| ||||||||
Sbjct 36625 TCAGTGTCTTAACAAAGATCTGCAT 36601
>seq877
Length=50207
Score = 93.3 bits (102), Expect = 4e-14
Identities = 151/213 (71%), Gaps = 6/213 (3%)
Strand=Plus/Minus
Query 48524 TGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGT-CGCTCGTCCTCCAGCTG 48582
|| || ||||||||||| || |||||||| || || | || || | ||||| |||||
Sbjct 31676 TGGAGGGTGCTCTCCTTCTGGATGTTGTAGTC-GCTCAGGGTGCGGCCATCCTCGAGCTG 31618
Query 48583 CTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTTGTCCATAATTTT 48642
||| ||| | | || | |||||||| ||| || | | ||||||||| ||| ||
Sbjct 31617 CTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTT 31558
Query 48643 CTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTTATGGTTTTACCG 48700
||||| | | || ||||| |||| ||||||| ||| | || || || || ||
Sbjct 31557 GGACTTGACGTTGTCG--ATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCC 31500
Query 48701 GTGAGAGTTTTCACAAAAATCTGCATCGTGTCT 48733
||||| || || || |||||||||||| || ||
Sbjct 31499 GTGAGGGTCTTGACGAAAATCTGCATCTTGCCT 31467
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421246656410885
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |