Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_005946.1 Length=105903 Score E Sequences producing significant alignments: (Bits) Value seq510 86.0 4e-12 >seq510 Length=17648 Score = 86.0 bits (94), Expect = 4e-12 Identities = 110/146 (75%), Gaps = 8/146 (5%) Strand=Plus/Plus Query 71419 GTCATCCTGGAGGGAAAGGCGTGGGGGTTGATGATGAGGTCGGGCACCACCCCGTCCTTG 71478 ||||| | || |||| |||||||||||||||||||| ||||||| | || || || Sbjct 13684 GTCATACGAGACGGAATGGCGTGGGGGTTGATGATGATGTCGGGCGTAATTCCCTCTCTG 13743 Query 71479 TCGAAGGGCATGTCCTCCTG--GGTCAG-GACAGCTCCGCATGTCCCCTTTTGCGCCGTG 71535 ||| |||||||||||||| ||| || |||| || || |||||||| ||||| Sbjct 13744 GTGAACGGCATGTCCTCCTGCCGGTAAGTGACA---CCAATAGTGCCCTTTTG-TCCGTG 13799 Query 71536 A-ATGACGCAAACTTGTCGCCCATCT 71560 | |||||||||||||| || |||| Sbjct 13800 ACGAGACGCAAACTTGTCACCAATCT 13825 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 338761146104040