Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq826 107 3e-19
seq717 104 4e-18
>seq826
Length=55858
Score = 107 bits (118), Expect = 3e-19
Identities = 86/101 (85%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || || |||||||| || ||
Sbjct 4598 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGCATTACCAAGCCCGCCAT 4540
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| |||||||||||||| ||||||||| ||||||
Sbjct 4539 CCGACGTCTCGCTCGTCGTGGTGGTGTCAAGCGTATCTCTG 4499
Score = 86.0 bits (94), Expect = 1e-12
Identities = 118/165 (72%), Gaps = 0/165 (0%)
Strand=Plus/Minus
Query 16528 CTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTAT 16587
||||| | || |||| || |||| |||| ||| | ||| ||||||| || || ||
Sbjct 4436 CTCTGCAGTGATCTACGAGGAGACCCGTGGTGTCCTCAAGTCCTTCCTCGAGGGTGTCAT 4377
Query 16588 CCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATAT 16647
|| |||||| || || ||||||||||| || || ||||| ||||| || | || |
Sbjct 4376 CCGTGATGCCGTCACATACACCGAGCACGCCAAGCGCAAGACCGTCACATCACTAGACGT 4317
Query 16648 CGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGG 16692
|||||||| ||||||| || ||||| | | || ||||| ||
Sbjct 4316 TGTCTATGCCCTGAAACGACAGGGCCGCACCCTGTACGGTTTCGG 4272
>seq717
Length=50147
Score = 104 bits (114), Expect = 4e-18
Identities = 85/101 (84%), Gaps = 2/101 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| |||| ||| |||||| || |||||||| || || |||||||| || ||
Sbjct 32039 GCCAAGCGTCACCGCAAGAT-TCTTCGTGACAACATCCAGGGCATTACCAAGCCTGCCAT 31981
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTG 16532
||| ||||| || ||||||||||| ||||||||| ||||||
Sbjct 31980 CCGACGTCTCGCCCGTCGTGGTGGTGTCAAGCGTATCTCTG 31940
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79074390838305
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |