Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq736 322 1e-82 >seq736 Length=134049 Score = 322 bits (356), Expect = 1e-82 Identities = 1063/1632 (65%), Gaps = 38/1632 (2%) Strand=Plus/Plus Query 363547 TTCACGCACGCCACGCCAACAATGTACAATGCTGGAACTC-GTAATCCACAGATGTCTTC 363605 ||||| |||||| | || || | | ||||||||| || | | || || ||| |||| || Sbjct 46701 TTCACCCACGCCTCCCCTACCCTCTTCAATGCTGGCACCCCGCAAGCC-CAGCTGTCCTC 46759 Query 363606 TTGCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAA 363665 ||||| || | | ||||||||||| ||| |||||||||| |||||| || |||| Sbjct 46760 ATGCTTCCTGGTGGACATGAAGGACGACAGCATTGAGGGTATCTATGACACCCTGAAGAC 46819 Query 363666 TTGTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGT-ATCGATCCACAATGTTCGTG 363724 ||||| | |||||||||| || || || || ||| | | || ||||| | |||| Sbjct 46820 GTGTGCCATGATTTCCAAGATGGCTGGTGGCATCGGTCTGAACG-TCCACCGCATCCGTG 46878 Query 363725 C-ACAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTT 363783 | || | | ||||| |||||| || ||| || || | | |||||||| Sbjct 46879 CCACTGG-CTCCTACATCGCCGGCACCAACGGCACCTCCAACGGCATTATCCCCATGCTG 46937 Query 363784 CGTGTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGGAGGAAAGCGCAAAGGGGCG 363843 || || || |||| ||||| | ||||||||||||||||| ||||| || || Sbjct 46938 CGAGTCTTCAACAACACTGCCCGATACGTCGACCAGGGTGGCAACAAGCGTCCTGGTGCC 46997 Query 363844 TTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAA 363903 ||||| || || |||||||| || ||||| | ||||| || ||||| ||||| || Sbjct 46998 TTTGCCATCTACCTCGAGCCCTGGCACGCCGACGTCTTTGACTTCCTTGATCTCCGCAAG 47057 Query 363904 AACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGAC 363963 ||| || || ||||| | || || || || ||||| ||| || ||| | | || Sbjct 47058 AACCACGGCAAGGAGGAGGTTCGCGCCCGCGACTTGTTCCTTGCTCTGTGGATCCCCGAT 47117 Query 363964 CATTTTATGAAGCGCGTGGAGGCAGGTAA--GAATTGGTCACTCTTTTGCCCACACGAAT 364021 | || |||||||| || ||| | | | | | ||| | ||| | ||||| |||||| Sbjct 47118 CTCTTCATGAAGCGTGTCGAG--AAGAACTTGGACTGGACGCTCATGTGCCCCAACGAAT 47175 Query 364022 GTCCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTGCTCTATACGAAAAGTATGAAT 364081 | || |||||| | || | || || || | || ||||| ||||||||||| || Sbjct 47176 GCCCTGGTCTTGCTGACTGCTACGGCGAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGA 47235 Query 364082 CGGAGGGAAAGGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATT 364141 ||||||| | ||||||||| || | || |||||||| |||| ||||| |||| Sbjct 47236 GGGAGGGACGTGGTCGTAAGACCATCCGTGCTCAGAAGCTGTGGTACTCCATCCTGGAGG 47295 Query 364142 CGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCA 364201 | |||| ||||| || | |||| ||| | ||||| || |||||||||||| || Sbjct 47296 CCCAGACCGAGACTGGTAACCCCTTCATGCTTTACAAGGACCACTGCAACCGCAAGAGCA 47355 Query 364202 ACCAGCAGCACCTTGGTACAATTCAGCAGAGC-AACCTATGTACCGAGATTATTGAATAC 364260 ||||| || || | || || | || |||| | ||||| || || ||||| ||||| ||| Sbjct 47356 ACCAGAAGAACTTGGGCACCA-TCCGCAGCTCTAACCTCTGCACTGAGATCATTGAGTAC 47414 Query 364261 ACCGCTCCCGACGAGACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGT- 364319 || ||||||||| || || || ||| | || || | || ||||| || ||||| Sbjct 47415 TGTGCCCCCGACGAGGTCGCTGTCTGCAACTTGGCCTCTCTGGCCCTTCCCGCCTTTGTC 47474 Query 364320 -----AAAAGATGGTACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACT 364374 || || || | ||| | || | ||| | || || ||| | || | | Sbjct 47475 GACTACAACGAGGGCTGCTACGACTTCAAGAAGCTTCACGAAGTCACC-AAGGTGGTCGT 47533 Query 364375 -TGCAATCTCGACAAGGTTATCGACAAGAATTATTATCCAATTCCTGAAGC-CG----AG 364428 |||| ||| || | ||||| ||| | || || | || || || || Sbjct 47534 CCGCAACCTCAACCGCATCATCGATGTGAACCACTACCCCGTCGAGGAGGCTCGCAACAG 47593 Query 364429 CGTTCTAATATGCGTCATCGCCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTT 364488 | || ||||| || || || || ||| | ||||| ||||| || ||||||| || Sbjct 47594 C-----AACATGCGCCACCGACCTATCGGTGTCGGTGTCCAGGGTCTTGCTGACGCGTTC 47648 Query 364489 ATGATGCTCAAGATGGCATTTGATTCGCCTGACGCTCGTGTTCTAAATAAGGAGATCTTT 364548 | || || | ||||| || || || ||||| | || || ||| ||||||| Sbjct 47649 CTCGCTCTGCGTCTGCCCTTTGAGTCTCCCGAGGCTCGCGAGCTGAACAAGCAGATCTTC 47708 Query 364549 GAAACAATGTATTTTGCCGCAATGACTGCTTCGTGTGATTTGGCAAAAACCAAGGGAAAG 364608 || || || || |||||| | ||||| || | || || | |||| Sbjct 47709 GAGACCATTTACCATGCCGCCCTTGAAGCTTCCATGGAGATTGCCAAGGTCGAGGGCCCC 47768 Query 364609 TACTCTACTTATGAGGGGTCCCCTCTTTCGCAGGGAAAATTCCAGTTTGATCTATGGAAT 364668 || | | |||| || ||| || |||| | |||||| || | ||| | Sbjct 47769 TATGAATCGTTCAAGGGATCGCCTGCATCTGAGGGTATCCTCCAGTACGACATGTGGGAC 47828 Query 364669 GTCACGCCATCTGTCCGATGGAACTGGGATACGCT-ACGTTCCAACGTTAAGAAGCATGG 364727 |||| ||| || | || ||| | ||||| | || | | | | | ||| |||| || Sbjct 47829 GTCAAGCCCTCCGACCTGTGGGAGTGGGACTCCCTCAAGGAGC-AGATCAAGGAGCACGG 47887 Query 364728 TACTCGCAA---CTCCCTCGTTACAGCGCCCATGCCCACGGCTTCTACTGCACAGATCCT 364784 | ||||| || ||||| || || |||||||| || ||| | ||||| || Sbjct 47888 TGTCCGCAACAGCTTGCTCGT---CGCTCCTATGCCCACTGCCAGTACCTCTCAGATTCT 47944 Query 364785 CGGAAACAACGAGTGCTTCGAACCGTTTACAAGCAATCTTTATTCACGCCGGGTTCTTTC 364844 || |||||||| |||||||| || | || ||| | || || || || ||| | Sbjct 47945 GGGCAACAACGAATGCTTCGAGCCCTACACCTCCAACATCTACCAGCGACGTGTCCTTGC 48004 Query 364845 CGGAGAATTTCCGGTAGTTAATAAGTACCTAGTCAAGGATCTTTCCGACCGCGGGCTGTG 364904 || || || | ||| || || | || ||||||| || |||| ||| ||||| Sbjct 48005 TGGTGAGTTCCAGGTTGTCAACCCTTGGCTTCTCAAGGACCTGGTCGACACCGGCCTGTG 48064 Query 364905 GGGTGACAGCATGAAGAACTATATCATCGCCGCTAATGGTTCTGTGCAGAACATTCCAGG 364964 | |||| |||||||||| ||||| |||| || || || | ||||||||||| Sbjct 48065 GTCTGACGCCATGAAGAACCGCATCATTGCCGAGAACGGCTCCATCCAGAACATTCCCAA 48124 Query 364965 ATTTCCAGAAGATCTGAAGCCTATTTACAAAACCGTATGGGAAATTTCCATGCGAACTCT 365024 | || || || | ||| | | ||||| ||||| ||||| || || ||| | Sbjct 48125 CATCCCCGAGGACATCAAGGCCCTGTACAAGACCGTCTGGGAGATATCTCAGCGTCAAAT 48184 Query 365025 CATTGATATGGCGGCCGATCGCGGTGCTTTTATCTGTCAGAGCCAGTCGTTTAACGTATT 365084 | | | |||||||| ||||| |||||||| ||| ||| |||||| | ||| | Sbjct 48185 CGTCCAGATGGCGGCTGATCGTGGTGCTTTCATCGACCAGTCCCAGTCCCTAAACATCCA 48244 Query 365085 CATGACTCAGCCAACCTCCGCCAAGCTTACATCCATGCATTTCTACGGGTGGAAATCCGG 365144 ||||| | || || | |||| | || |||||| ||| ||| ||||| ||| Sbjct 48245 CATGAAGGACCCCACGATGGGCAAGATCACCAGCATGCACTTCACCGGCTGGAAGCTCGG 48304 Query 365145 TCTTAAGACAGG 365156 ||| ||||| || Sbjct 48305 TCTCAAGACCGG 48316 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303338821192070