Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq736 185 8e-42
seq804 178 1e-39
seq373 134 1e-26
seq877 122 8e-23
seq764 96.9 3e-15
>seq736
Length=134049
Score = 185 bits (204), Expect = 8e-42
Identities = 921/1445 (64%), Gaps = 45/1445 (3%)
Strand=Plus/Minus
Query 145058 TTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGTGAAGGGT 145117
||||| ||||| ||||| || || | ||||| ||| || | ||| || ||| ||||
Sbjct 48025 TTGACAACCTGGAACTCACCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGGGC 47966
Query 145118 TCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTACGCCACC 145177
|| || | ||||| |||||||| || |||| ||| | || |||||||| || ||
Sbjct 47965 TCGAAGCATTCGTTGTTGCCCAGAATCTGAGAGGTACTGGCAGTGGGCATAGGAGCGACG 47906
Query 145178 AATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCAATCCCAT 145237
| || ||||| | ||||||| |||||| | ||||| || | |||| |||||
Sbjct 47905 AGCAAGCTGTTGCGGACACCGTGCTCCTTGATCTGCTCCTTGAGGGAGTCCCACTCCCAC 47846
Query 145238 AG--CGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCCCTC-GCTGGCGGGG 145294
|| || || ||| | |||||||||||||||||||| | || ||||| | || || |
Sbjct 47845 AGGTCGGAG--GGCTTGACGTCCCACATGTCGTACTGGAGGATACCCTCAGATGCAGGCG 47788
Query 145295 CTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTGGCGAGCTC---GCAACTCGCCTCC 145351
| ||||| || || || |||| ||||| | ||| | || || ||
Sbjct 47787 ATCCCTTG-AACGATTCATAGGGGCCCTCGACCTTGGCAATCTCCATGGAA---GCTTCA 47732
Query 145352 AGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATCGC-TTCATCG-- 145408
|| ||| | ||||| |||||| || ||| |||| ||| |||| | |||
Sbjct 47731 AGGGCGGCATGGTAAATGGTCTCGAAGATCTGCTTGTTCAGC----TCGCGAGCCTCGGG 47676
Query 145409 -CTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATTCCCACGCC 145467
||| | |||| ||||| | || || || || || ||||| | || || ||
Sbjct 47675 AGACTCAAAGGGCAGACGCAGAGCGAGGAACGCGTCAGCAAGACCCTGGACACCGACACC 47616
Query 145468 GATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTCGATAGGATATCGATTACGGTC 145527
||| || || || ||||||||| | | ||| ||||| || || | || ||
Sbjct 47615 GATAGGTCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTCGACGGGGTAGTGGTTCACATC 47556
Query 145528 GATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAACTTTTCAAAGTC 145587
||| || || | ||| || || || ||||| || | | | | ||| | |||||
Sbjct 47555 GATGATGCGGTTGAGGTTGCGGACGACCACCTTGGTGACTTCGTGAAGCTTCTTGAAGTC 47496
Query 145588 AAACCGAGCCTCGTCAACGACCACACAGCTATTGACGGCGATCGACGCCAAATTACAAAC 145647
| | |||||| | | ||| || | ||| | || ||||| || || ||
Sbjct 47495 GTAGCAGCCCTCGTTGTAGTCGACAAAGGCGGGAAGGGCCAGAGAGGCCAAGTTGCAGAC 47436
Query 145648 TGCCGTCTCCTCGGCGTCGCTGTATTGTACGATCTCGGCGCACAAATT---GCTACATTT 145704
|| ||| |||| | | | ||| | | |||||| | ||| | || ||| |
Sbjct 47435 AGCGACCTCGTCGGGGGCACAGTACTCAATGATCTCAGTGCAGAGGTTAGAGCTGC---G 47379
Query 145705 GATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTGTAGAGCATGTA 145764
|||||| |||| || | ||| || || || | |||||| ||||||||| |||||| |
Sbjct 47378 GATGGTGCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAAAGCATGAA 47319
Query 145765 CGGTCCGCCAGTCTCCACCTGCGTCTCCACGATAAAACGGTGCAAGTCCTGCGCACGCAC 145824
|| |||||||| ||| | ||||| ||| | || | ||| ||||| |
Sbjct 47318 GGGGTTACCAGTCTCGGTCTGGGCCTCCAGGATGGAGTACCACAGCTTCTGAGCACGGAT 47259
Query 145825 CTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCCTCAAACGCGGAACC 145884
|| | || ||||| ||||| || ||| || |||||||| | ||
Sbjct 47258 GGTCTTACGACCACGTCCCTCCCTCTCGTACTTTTCGTACAGAGCCTCAAACTCCTCGCC 47199
Query 145885 GTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGACCATACGCCGTTGGC 145944
|||||| || | || || || || | |||||| ||||| |||| ||| | |||
Sbjct 47198 GTAGCAGTCAGCAAGACCAGGGCATTCGTTGGGGCACATGAGCGTCCAGTCCAAGTTCTT 47139
Query 145945 GTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATCAAGTCGCGCGCTTT 146004
| ||| |||| ||| || | ||| || | |||||| || | ||||||||| ||
Sbjct 47138 CTCGACACGCTTCATGAAGAGATCGGGGATCCACAGAGCAAGGAACAAGTCGCGGGC--- 47082
Query 146005 GCAATCCTCAGC--ACCCATGTTTC--GCTTCAAATTAAGCACACTATAGATGTCCGCGT 146060
|| | |||| | || || ||| || | || ||| | | ||| ||| ||||
Sbjct 47081 GCGAACCTCCTCCTTGCCGTGGTTCTTGC-GGAGATCAAGGAAGTCAAAGACGTCGGCGT 47023
Query 146061 GCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCG---TTTGCCACCCTGGTCCACGT 146117
|||| || || | |||| ||| | ||| || || |||||||||||||| ||||
Sbjct 47022 GCCAGGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTGCCACCCTGGTCGACGT 46963
Query 146118 GACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCTGGCTACGCCGTTCG 146177
|| | ||||||| ||||| |||| |||||| | |||| ||| |||||| |
Sbjct 46962 ATCGGGCAGTGTTGTTGAAGACTCGCAGCATGGGGATAATGCCGTTGGAGGTGCCGTTGG 46903
Query 146178 TAGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTCACGCCGAGACCGCC-G 146236
| | || || ||| || || | || || || |||| |||| || || |
Sbjct 46902 TGCCGGCGATGTAGGAGCCAGTGGCACGGATGCGGTGGACGTTCAGACCGATGCCACCAG 46843
Query 146237 CCGTACTTGGATATAGCGGCGCA-GTCGCCGAGCGTCTCGTAGATGCCGTCAATGCTATC 146295
|| | |||||| || ||| || ||| | || || || ||||| || |||||||| ||
Sbjct 46842 CCAT-CTTGGAAATCATGGCACACGTCTTC-AGGGTGTCATAGATACCCTCAATGCTGTC 46785
Query 146296 G--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCGGCGTCCCCGCCGAG 146353
| |||| ||| | | ||| ||||| ||| ||| ||| || ||| || || || |
Sbjct 46784 GTCCTTC--ATGTCCACCAGGAAGCATGAGGACAGCTGGGCTTGCGGGGTGCCAGCATTG 46727
Query 146354 AACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCCGATACGTTTCGATA 146413
|| | || ||| ||||| || || | || | | ||| | | || || ||||
Sbjct 46726 AAGAGGGTAGGGGAGGCGTGGGTGAAGAACTTGCTGGACATGAGGTGGTATGTCTCGAGG 46667
Query 146414 GCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGAGCATGTGTTGGGGC 146473
| | ||||||||| || ||||| | || || ||||| | ||||||||| |||
Sbjct 46666 ACACGCTCAATGTCGTCTCCCCAGATGCCAACGGCCACTCGCATAATCATGTGTTGTGGC 46607
Query 146474 CGCTC 146478
|||||
Sbjct 46606 CGCTC 46602
>seq804
Length=175399
Score = 178 bits (196), Expect = 1e-39
Identities = 360/523 (69%), Gaps = 25/523 (5%)
Strand=Plus/Minus
Query 46084 ATGCCGTGCGTGCGCAAGAAAACCGACTGGGCGATGAAGTGGATCAACAGCAGCACCGCG 46143
|| || ||| | |||||||| | ||||||||||| |||||| | || | | ||
Sbjct 35368 ATTCCTTGCATTCGCAAGAAGGCTGACTGGGCGATTCGATGGATCCAGGACAAGAACTCG 35309
Query 46144 ACTTTCGCCGAGCGTATGGTGGCCTTTGCGATTGTGGAGGGCGTCtttttttCTGGCAGT 46203
| || ||| ||||| | || |||||||| ||| ||||| |||| || ||
Sbjct 35308 TCCTTTGCCCAGCGTCTCGTTGCCTTTGCCGCTGTCGAGGGTATCTTCTTCAGCGGTGCC 35249
Query 46204 TTTGCCGCCATCTTTTACATCAA-AACCAAGGGCATCATGCCCGGCCTGACGTTTAGCAA 46262
|||||| |||| || | |||| || | ||| | |||||||||||||||| ||| |||
Sbjct 35248 TTTGCCTCCATTTTCTGGCTCAAGAAGCGAGGTC-TCATGCCCGGCCTGACCTTTTCCAA 35190
Query 46263 CGAGCTGATATCGCGCGACGAGGGCCTGCATACGGACTTTGCGTGTCT-CTACTATAACA 46321
|||||| || || || |||||||| ||||| ||||||||||| || || || | ||
Sbjct 35189 CGAGCTCATCTCTCGTGACGAGGGTCTGCACACGGACTTTGCCTGCCTGCTGC----ACT 35134
Query 46322 CTCGCGTGCACGACAAGCTTGCGCCCGACACCGTGCTGA------GCATGTTCAAGGAGG 46375
||| | || | || ||||| | || | | ||| ||| ||| || |
Sbjct 35133 CTCACCTGAAGAAC-----CGCGCCAG-CAAGGAGGTGATTCGTGACATCATCACCGACG 35080
Query 46376 CGGTGGCCATTGAGAAGGAGTTTTTTACGGCCGCACTGCCCGCTGCCCTGCTGGGCATGA 46435
| || ||| ||| |||||||||| || | || ||||| ||||||||||||||||
Sbjct 35079 CCGTCCGCATCGAGCAGGAGTTTTTGACCGAAGCTCTGCCTTGCGCCCTGCTGGGCATGA 35020
Query 46436 ACGCACAGTCAATGTGCGACTACATCGAGTTTGTAGCGGACCGACTGCTCGTGCAGCT-T 46494
|| | | ||| | ||||| |||||||| || ||||| ||||| || |||| |
Sbjct 35019 ACTCCAACCTCATGAAGCAGTACATTGAGTTTGTCGCCGACCGCCTGCTGGT--AGCTCT 34962
Query 46495 CACCAGC-CGAAGCATTTTCACG-CGCGCAATCCATTTGAGTTTATGAACAACATCTCCC 46552
| || | |||| | | || | || ||| || ||||| |||||| | ||||| ||||
Sbjct 34961 CGGCAACGAGAAG-GTGTACAAGTCGTCCAACCCCTTTGACTTTATGGAGAACATTTCCC 34903
Query 46553 TGGAGGGCAAAACTAATTTTTTCGAAAAGCGCGTCGGCGAGTA 46595
||| ||||| || || || || || |||||||||| ||| ||
Sbjct 34902 TGGGCGGCAAGACCAACTTCTTTGAGAAGCGCGTCGCCGACTA 34860
>seq373
Length=44988
Score = 134 bits (148), Expect = 1e-26
Identities = 167/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | || || || | || | ||| |||||||| || |||||||| |||
Sbjct 36085 CCACCACGAAGGCGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCGGAG 36026
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || |||||| ||||||||||| || |||| | |||||||||||||||||||
Sbjct 36025 AGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGG 35966
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||| | | || | || |||| |||||||
Sbjct 35965 ATACCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCGACC 35906
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATGA 131236
|||| ||| | ||| || ||||| || || || ||||| ||||||||||
Sbjct 35905 TCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATGA 35857
Score = 125 bits (138), Expect = 7e-24
Identities = 164/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| || | ||| || || || || | ||| |||||| || |||||||| ||||||
Sbjct 36599 CCACCACGAAGACGGAGGACCAAGTGCAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 36540
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||||| ||| || |||||||| || ||| | || | |||||||||||||||||
Sbjct 36539 AAAGTGCGGCCGTCTTCCAGCTGCTTACCAGCGAAAATCAGGCGCTGCTGGTCCGGAGGA 36480
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||||| | || | |||||| | |||||||
Sbjct 36479 ATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCAATAGTATCAGATGACTCGACC 36420
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | ||| || || || || || || ||||||||||||||
Sbjct 36419 TCCAGGGTGATGGTCTTTCCTGTGAGGGTCTTGACGAAAATCTGCAT 36373
Score = 113 bits (124), Expect = 4e-20
Identities = 155/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
|||||||| | ||| || || | || | || |||||||| || |||||||| |||
Sbjct 36371 CCACCGCGAAGACGGAGGACAAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGAG 36312
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| ||| || |||||| ||||||||||| || |||| | |||||||||||||||||||
Sbjct 36311 AGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGGG 36252
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| ||| || ||||| | || | || || | |||||| |
Sbjct 36251 ATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCAACC 36192
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
|||| || | || || ||||| || || || ||||
Sbjct 36191 TCGAGAGTGATCGTCTTGCCGGTCAGGGTCTTGACGA 36155
Score = 100 bits (110), Expect = 3e-16
Identities = 159/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066
|||||| || | ||| || || | || | || |||||| || |||||||| |||||
Sbjct 36828 GCCACCACGGAGACGGAGAACCAGGTGCAGAGTGCTCTCCTTCTGGATGTTGTAGTCGCT 36769
Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126
|| ||| || ||| || |||||||| || || |||| || ||||||||||| || ||
Sbjct 36768 CAAGGTACGACCGTCTTCCAGCTGCTTACCAGCAAAGATCAAGCGCTGCTGGTCAGGCGG 36709
Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186
||| || || ||||| || ||| ||||| | || | ||||| | || || |
Sbjct 36708 GATACCCTCCTTGTCCTGAATCTTCGACTTGACGTTGTCGATGGTATCAGATGATTCCAC 36649
Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | |||| || ||||| || || || || || || ||||||||
Sbjct 36648 TTCCAGAGTAATCGTCTTACCCGTCAGTGTCTTAACAAAGATCTGCAT 36601
>seq877
Length=50207
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067
||||| |||| ||||| || | || | ||| |||||| || |||||||| ||||||
Sbjct 31700 CCACCACGCAGGCGCAGGACCAGGTGGAGGGTGCTCTCCTTCTGGATGTTGTAGTCGCTC 31641
Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127
| |||||| ||||| ||||||||||| || |||| | |||||||||||||| |||
Sbjct 31640 AGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCCGGGGGG 31581
Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187
|| || || ||||| || || ||||| | || | || |||| ||||| |
Sbjct 31580 ATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTGTCGATGGTGTCGGAAGACTCCACC 31521
Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| | ||| | || || || || || || || ||||||||||||||
Sbjct 31520 TCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACGAAAATCTGCAT 31474
>seq764
Length=87966
Score = 96.9 bits (106), Expect = 3e-15
Identities = 130/181 (72%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 131045 CCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGA 131104
|||| || |||||||| ||| || ||| || ||||| |||||||| || ||| |||
Sbjct 48336 CCTTCTGGATGTTGTAGTCGGACAGGGTTCGGCCATCCTCGAGCTGCTTACCAGCGAAGA 48395
Query 131105 TTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCT 131164
| || |||||||||||||| || || || || ||||| ||| || ||||| | |
Sbjct 48396 TCAATCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGACTTGACATTGT 48455
Query 131165 CCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGA 131224
| | || |||| |||||||| || | ||| | ||| || || || || || || ||||
Sbjct 48456 CGATCGTGTCGGAGGACTCGACCTCAAGGGTGATGGTCTTGCCCGTCAGGGTCTTCACGA 48515
Query 131225 A 131225
|
Sbjct 48516 A 48516
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 472007578358400
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