Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq877 82.4 7e-11
>seq877
Length=50207
Score = 82.4 bits (90), Expect = 7e-11
Identities = 135/192 (70%), Gaps = 2/192 (1%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | || || || | ||||| | || |||||||| ||
Sbjct 31474 ATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCTTCC 31533
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| ||||| | ||| | || | ||| ||||| || || || || || |||||
Sbjct 31534 GACACCATCGACAACGTCAAGTCCAAGATTCAG-GACAAGGAGGGCATCCCCCCGGACCA 31592
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
||||| | || ||||||||||| || | || |||| ||||| || |||| |||||
Sbjct 31593 GCAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTACAA 31652
Query 25178 TATTCAAAAAGA 25189
|| || || ||
Sbjct 31653 CATCCAGAAGGA 31664
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433323326151275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |