Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq804 150 2e-31 >seq804 Length=175399 Score = 150 bits (166), Expect = 2e-31 Identities = 378/568 (67%), Gaps = 11/568 (2%) Strand=Plus/Plus Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150 ||| |||||||| || || | ||| ||||| || || || | ||| ||| || || | Sbjct 35144 GCAGGCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAG 35203 Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210 || || | || ||||| ||||||||||| || || || ||||| ||| || || Sbjct 35204 GCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAA 35263 Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-- 93268 ||||| || || || ||||| || || | ||| | |||||| | || || || Sbjct 35264 GATACCCTCGACAGCGGCAAAGGCAACGAGACGCTGGGCAAA---GGACGAGTTCTTGTC 35320 Query 93269 CT-GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 || ||||||| | ||||| || || || || ||| ||||| | || || || || Sbjct 35321 CTGGATCCATCGAATCGCCCAGTCAGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGC 35380 Query 93328 GTTAAATAGGTAATCTCGCTCG-TCCGAATCTCGTATGTATGTATCGATTAACAGAGAAT 93386 ||| || ||||| | |||| | | | || | || || || ||||| | ||| || | Sbjct 35381 GTTGAAGAGGTAGTTGCGCTGGCTGTGCTCCTTG-ATATAAGTGTCGATGAGCAGGGAGT 35439 Query 93387 ACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG 93446 || | || || |||| |||||||| || ||||| ||||| || || | ||| || | Sbjct 35440 ACGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAAAAGCAGCGAGCCTCGG 35499 Query 93447 TGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATG 93506 |||||| || || || | ||| || || || || ||||| || || || || | Sbjct 35500 GGATCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGG 35559 Query 93507 CTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTAT 93563 | || || || |||| || || || || | ||||| ||||| || | | || | Sbjct 35560 CGGCGAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGT 35619 Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623 ||| ||| || || || || || || | || ||| | ||||| || || || || | Sbjct 35620 TCCAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAGGAAGCCTCGG 35679 Query 93624 CTTTTTTGTACATATCCCATATGTCTTG 93651 | ||||||||||| | ||| || | ||| Sbjct 35680 CCTTTTTGTACATTTGCCAGATCTGTTG 35707 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556854639727400