Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq804 150 2e-31
>seq804
Length=175399
Score = 150 bits (166), Expect = 2e-31
Identities = 378/568 (67%), Gaps = 11/568 (2%)
Strand=Plus/Plus
Query 93091 GCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTTAA 93150
||| |||||||| || || | ||| ||||| || || || | ||| ||| || || |
Sbjct 35144 GCAGGCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAG 35203
Query 93151 ACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaaaa 93210
|| || | || ||||| ||||||||||| || || || ||||| ||| || ||
Sbjct 35204 GCCGGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAA 35263
Query 93211 TATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG-- 93268
||||| || || || ||||| || || | ||| | |||||| | || || ||
Sbjct 35264 GATACCCTCGACAGCGGCAAAGGCAACGAGACGCTGGGCAAA---GGACGAGTTCTTGTC 35320
Query 93269 CT-GATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327
|| ||||||| | ||||| || || || || ||| ||||| | || || || ||
Sbjct 35321 CTGGATCCATCGAATCGCCCAGTCAGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGC 35380
Query 93328 GTTAAATAGGTAATCTCGCTCG-TCCGAATCTCGTATGTATGTATCGATTAACAGAGAAT 93386
||| || ||||| | |||| | | | || | || || || ||||| | ||| || |
Sbjct 35381 GTTGAAGAGGTAGTTGCGCTGGCTGTGCTCCTTG-ATATAAGTGTCGATGAGCAGGGAGT 35439
Query 93387 ACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCG 93446
|| | || || |||| |||||||| || ||||| ||||| || || | ||| || |
Sbjct 35440 ACGTCTCGGAGTGGATGTTCTCCATCATGATCTGGAAGCCGTAAAAGCAGCGAGCCTCGG 35499
Query 93447 TGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATG 93506
|||||| || || || | ||| || || || || ||||| || || || || |
Sbjct 35500 GGATCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGG 35559
Query 93507 CTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAA---GCTTAT 93563
| || || || |||| || || || || | ||||| ||||| || | | || |
Sbjct 35560 CGGCGAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGT 35619
Query 93564 CCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTG 93623
||| ||| || || || || || || | || ||| | ||||| || || || || |
Sbjct 35620 TCCAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCAGAAGGAAGCCTCGG 35679
Query 93624 CTTTTTTGTACATATCCCATATGTCTTG 93651
| ||||||||||| | ||| || | |||
Sbjct 35680 CCTTTTTGTACATTTGCCAGATCTGTTG 35707
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556854639727400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |