Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq877 120 3e-22
seq373 105 6e-18
>seq877
Length=50207
Score = 120 bits (132), Expect = 3e-22
Identities = 165/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 22216 AAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACC 22275
|||||||| ||||| || || || | || || || ||| |||| ||||| ||||| |
Sbjct 31471 AAGATGCAGATTTTCGTCAAGACCCTCACGGGGAAGACGATCACCCTTGAGGTGGAGTCT 31530
Query 22276 ACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGAT 22335
|||| ||| | ||| | |||| || ||||| ||||||||||| || || || ||
Sbjct 31531 TCCGACACCATCGACAACGTCAAGTCCAAGATTCAGGACAAGGAGGGCATCCCCCCGGAC 31590
Query 22336 CAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTAC 22395
|| || || || || ||||||||||| ||| | |||||| ||||||| | ||| |||
Sbjct 31591 CAGCAGCGCCTGATCTTTGCCGGCAAGCAGCTCGAGGATGGCCGCACCCTGAGCGACTAC 31650
Query 22396 AACATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||||| || || || |||| | || | || |||| |||| || |||
Sbjct 31651 AACATCCAGAAGGAGAGCACCCTCCACCTGGTCCTGCGCCTGCGTGGTGGT 31701
>seq373
Length=44988
Score = 105 bits (116), Expect = 6e-18
Identities = 142/198 (72%), Gaps = 0/198 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || || || || || | ||||| || || |||| || || || || | ||
Sbjct 35859 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACCCTCGAGGTCGAGTCGTCC 35918
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| ||| | ||| || | || || || || |||||||||||||| || || || ||
Sbjct 35919 GACACCATCGACAATGTGAAGTCCAAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAG 35978
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| ||||| || ||||| ||||| ||| | ||||| ||| ||| ||||||| ||||||
Sbjct 35979 CAGCGTCTCATCTTTGCTGGCAAGCAGCTTGAGGACGGCCGAACCCTCTCCGACTACAAC 36038
Query 22399 ATTCAAAAAGAATCCACC 22416
|| || || || || |||
Sbjct 36039 ATCCAGAAGGAGTCTACC 36056
Score = 105 bits (116), Expect = 6e-18
Identities = 127/173 (73%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 22243 ACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGGACGATATCAAACAA 22302
||||| || ||| ||||||| || || || || | || ||| | ||| | ||||
Sbjct 36169 ACCGGCAAGACGATCACTCTCGAGGTTGAGTCCTCTGACACCATCGACAACGTCAAGTCC 36228
Query 22303 AAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAA 22362
|| || || |||||||||||||| || || || || || ||||| || ||||| |||||
Sbjct 36229 AAGATCCAGGACAAGGAGGGTATCCCTCCGGACCAGCAGCGTCTCATCTTTGCTGGCAAG 36288
Query 22363 CAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAGAATCCAC 22415
||| | ||||| ||| ||| ||||||| |||||||| || || || || ||
Sbjct 36289 CAGCTTGAGGACGGCCGAACCCTCTCCGACTACAACATCCAGAAGGAGTCTAC 36341
Score = 96.9 bits (106), Expect = 3e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || |||||||| || | || ||||| ||| | ||||| ||||||||| | |
Sbjct 36601 ATGCAGATCTTTGTTAAGACACTGACGGGTAAGACGATTACTCTGGAAGTGGAATCATCT 36660
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|||||| | ||| | |||| || ||||| |||||||||||||| || || || ||
Sbjct 36661 GATACCATCGACAACGTCAAGTCGAAGATTCAGGACAAGGAGGGTATCCCGCCTGACCAG 36720
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| || | || ||||| || || ||| | || || || ||| | ||| ||||||
Sbjct 36721 CAGCGCTTGATCTTTGCTGGTAAGCAGCTGGAAGACGGTCGTACCTTGAGCGACTACAAC 36780
Query 22399 ATTCAAAAAGA 22409
|| || || ||
Sbjct 36781 ATCCAGAAGGA 36791
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419723472840025
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |