Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_008603.1
Length=321240
Score E
Sequences producing significant alignments: (Bits) Value
seq703 114 3e-20
seq804 100 6e-16
seq466 96.9 7e-15
seq146 89.7 1e-12
>seq703
Length=42246
Score = 114 bits (126), Expect = 3e-20
Identities = 434/672 (65%), Gaps = 17/672 (3%)
Strand=Plus/Plus
Query 279696 GTAGGTTCTCTGTCGGGTGGTTGGAAGATGAAGCTGGCCCTCACTCGCGCCATTCTACTG 279755
|| || ||||| || |||||||||||||||||||| ||||| | || ||||| || |
Sbjct 20669 GTCGGCTCTCTCTCTGGTGGTTGGAAGATGAAGCTTGCCCTGGCCCGAGCCATGCTCAAG 20728
Query 279756 CGTGCCGATGTCCTACTGCTTGATGAGCCAACCAACCACATGGACACCACCAACGTAGCC 279815
||||||||||||| ||||| || || || || |||||| ||||| ||||| | |||
Sbjct 20729 GGTGCCGATGTCCTCCTGCTGGACGAACCTACTAACCACTTGGACGTTGCCAACATTGCC 20788
Query 279816 TGGCTAGTGTCCTACCTAACCAGTCTGAAGA--ATGTTTCTTCCCTCATTGTCTCTCACG 279873
||||| | | |||||| | |||| | | || | || || || || ||||
Sbjct 20789 TGGCTGGAGAACTACCTCA--AGTCGCACCCCGACATTACCAGTCTGATCGTGTCCCACG 20846
Query 279874 ACTCTGGCTTCCTAGATGCCGTGTGCTCTGCCATCATTCACTATGAGCAAAATCTGAAGC 279933
||||||| ||||| || ||| | | | ||| ||||| |||| || |||||
Sbjct 20847 ACTCTGGATTCCTGGACAACGTCACCACCGACATTTACCACTACGAGCCCAACAAGAAGC 20906
Query 279934 TCTCCAAGCACATCGGCAACCTGTCTGCTTTCGTGGCAAAG--CGCCCTGAGGCGGCCGC 279991
|| | ||| ||||||||| | || ||||| ||| | ||||| |||||
Sbjct 20907 TCGCTTGCTACAAGGGCAACCTGGCCGCCTTCGT--CAAGGTGCGCCCCGAGGCCAAGAG 20964
Query 279992 CTACTATGACCTGAAGGACGCCACCGCCAAGTGGGAATTCCCTGAGCCAGGGTTTCTGGA 280051
|||||| || | ||| | | ||| | |||||| || || | ||
Sbjct 20965 CTACTACACTCTTTCCGCATCCAATGTCCAGTTCAAGTTCCCTCCTCCGGGTATCCTCAC 21024
Query 280052 GGGCATCACATCAAAGGATCGCGCAATCAT--GAAGCTCCGTGGCGTCTCCTTTGCTTAT 280109
|| |||| || || || || ||||| | | ||| |||||| | | ||
Sbjct 21025 CGGTATCAAGTCGCAGACCCGTGCCATCATTCGCATGTCCAA--CGTCTCGTACACCTAC 21082
Query 280110 CCCAATGGCCCCAA--CATC--TTCAGCAGTGTCAACTCGCAGGTTTCTATGAACTCACG 280165
||| | |||| | || | || || ||| || | || || ||| ||
Sbjct 21083 CCCGGGGCTTCCAAGCCTTCACTCCACGAG-GTCTCCTGCTCTCTCTCGCTGTCCTCGCG 21141
Query 280166 GATTGGTGTCATTGGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGG 280225
| | | ||||||||||| |||||||| ||||||||||| ||||| | || || ||
Sbjct 21142 AGTGGCCATTATTGGACCCAACGGTGCGGGCAAGTCTACCCTGATCAAGCTGCTCACCGG 21201
Query 280226 CGAGACCCAGGCCACTGAGGGGTCCGTTTGGAAGCATCCCAACATGCGGATGGCTTACGT 280285
||||||| |||| || ||| |||||| |||||| | || || | ||| |
Sbjct 21202 CGAGACCATCCCCACCACTGGCAAGGTTGAGAAGCACCCCAACCTCCGAATCGGCTACAT 21261
Query 280286 CGCTCAGCACGCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACAT 280345
| ||||| || | | ||| |||||| |||||||| | ||| || ||||| || |
Sbjct 21262 CAAGCAGCATGCCCTGGAACACGTCGAGATGCACCTGGAGAAGACCCCCAACCAGTATCT 21321
Query 280346 TCAGTGGCGCTA 280357
|||||||| ||
Sbjct 21322 GCAGTGGCGATA 21333
>seq804
Length=175399
Score = 100 bits (110), Expect = 6e-16
Identities = 378/589 (64%), Gaps = 23/589 (4%)
Strand=Plus/Plus
Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622
|| ||||| || | |||||| |||| || || |||||| ||||| |||||||| |
Sbjct 34878 TCAAAGAAGTTGGTCTTGCCGCCCAGGGAAATGTTCTCCATAAAGTCAAAGGGGTTGGAC 34937
Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682
| |||||| ||| | ||| || ||||| | | |||||| || |||||||| |
Sbjct 34938 GACTTGTACACCTTCTCGTTGCCGAGAGCTACCAGCAGGCGGTCGGCGACAAACTCAATG 34997
Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCATACGACAAGGAATTGCCTCACAGATG 251742
||||| ||| || | ||||||||||| | || ||||| | || || |
Sbjct 34998 TACTGCTTCATGAGGTTGGAGTTCATGCCCAGCAGGGCGCAAGGCAGAGCTTCGGTCAAA 35057
Query 251743 AATTCCTTTTCGTTGGCAACTGCCTCCTCCACAATTGCCT---TCACCTG--TGCCAGAG 251797
|| |||| ||| || || || || | || | |||||| ||| | |
Sbjct 35058 AACTCCTGCTCGATGCGGACGGCGTCGGTGATGATGTCACGAATCACCTCCTTGCTGGCG 35117
Query 251798 ACAGCTTGTTCTCCAGCTTTGAGTACAGGAGCTCGCCAAACTGTTGGTGCAGACCCTCGT 251857
||||| ||| | |||| ||| || | |||| | ||||||||||||||
Sbjct 35118 CG-----GTTCTTCAGGTGAGAGTGCAGCAGGCAGGCAAAGTCCGTGTGCAGACCCTCGT 35172
Query 251858 CGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCCACGGTTCCTGAGCC 251917
| ||| ||||| ||||||||| | |||||| ||||| | || || ||| ||||||
Sbjct 35173 CACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCCGGGCATGAGACCTCGCTTCTTGAGCC 35232
Query 251918 AGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACACACCCATGCAACAA 251977
|||| || | | ||||| || ||| | | |||||||||| | | ||||| |
Sbjct 35233 AGAAAATGGAGGCAAAGGCACCGCTGAAGAAGATACCCTCGACAGCGGCAAAGGCAACGA 35292
Query 251978 GGCGCTCAGCAAACGA------CTTGTCCTGCGACAA--GAACTTCTGTGCCCATGCTGC 252029
| |||| ||||| || ||||||||| | | ||| || ||||| | ||
Sbjct 35293 GACGCTGGGCAAAGGACGAGTTCTTGTCCTGGATCCATCGAA--TC---GCCCAGTCAGC 35347
Query 252030 CTTCTTTCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGAGTTCCGCTCGGCATC 252089
|||||| | || || || || || || || | ||||| |||| |||| | |
Sbjct 35348 CTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTTGAAGAGGTAGTTGCGCTGGCTGTG 35407
Query 252090 GTCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATGGATG 252138
|||| ||| | || | || || |||||| |||| || ||||||
Sbjct 35408 CTCCTTGATATAAGTGTCGATGAGCAGGGAGTACGTCTCGGAGTGGATG 35456
>seq466
Length=80723
Score = 96.9 bits (106), Expect = 7e-15
Identities = 156/222 (70%), Gaps = 2/222 (1%)
Strand=Plus/Minus
Query 279345 GGTGAGGATCTGTGTGACTGTGATTTCTCGCTCGCATATGGTGGGAAGATTCTGCTAAAC 279404
||||||||||| || |||| ||||| || || || |||| ||||| ||||| |||
Sbjct 50312 GGTGAGGATCTCTGCAACTGCACCTTCTCTCTTGCCTACGGTGCCAAGATCCTGCTCAAC 50253
Query 279405 TCTACCCGCCTCAACATCAAGCGTGGCAACCGGTATGGTCTCATCGGTCCCAATGGAGCG 279464
|||| ||| | |||||||||| | || || |||||| ||||||||| || |
Sbjct 50252 CAGACCCACCTTCGCCTCAAGCGTGGTCAGCGTTACGGTCTCTGCGGTCCCAACGGTTCC 50193
Query 279465 GGTAAGAGCACTCTAATGCGCGCCATTGCAAACGGTCAGCTGGAAGGATTTCCTAACGCA 279524
|| ||| ||||| ||||| ||||| |||| ||| | || || || ||||| |||
Sbjct 50192 GGCAAGTCTACTCTCATGCGTGCCATCAACAACGAGCAGGTTGAGGGCTTCCCTAA-GCA 50134
Query 279525 -TCTGAGGTAAGGACAGTGTATGTAGAGCACGACATCGACTC 279565
|| || | ||| || | || ||||||||| | |||||
Sbjct 50133 GAGCGAAGTCAAGACCGTCTTCGTTGAGCACGACCTTGACTC 50092
Score = 89.7 bits (98), Expect = 1e-12
Identities = 122/168 (73%), Gaps = 2/168 (1%)
Strand=Plus/Minus
Query 280672 CCAAGCTGGGTCTGGACCCCGAGTTTACAACTCACTCTCGCATTCGCGGTCTTTCTGGAG 280731
|||| | |||||||| ||||| | | ||||| ||||| || ||||| ||||| |
Sbjct 48940 CCAACTTCGGTCTGGATGCCGAGCTGGTTTCCCACTCCCGCATGCGTGGTCTGTCTGGTG 48881
Query 280732 GCCAGAAGGTCAAACTTGTCATCGGAGCA-GCTCTGTGGCAACACCCTCACGTGATCGTT 280790
||||| ||||| |||| | | || |||| ||||| | || ||| |||||||
Sbjct 48880 GCCAGCGTGTCAAGACTGTCCTGGCTGCTTGCTCA-TGGCAGCGACCCCACTTGATCGTC 48822
Query 280791 CTCGACGAGCCTACCAACTATCTGGACCGCGAGAGCCTGGGCGCTCTG 280838
|| ||||||||||||||||| |||||||| || ||||| || |||
Sbjct 48821 CTTGACGAGCCTACCAACTACCTGGACCGTGACTCTCTGGGTGCCCTG 48774
>seq146
Length=52672
Score = 89.7 bits (98), Expect = 1e-12
Identities = 154/224 (69%), Gaps = 0/224 (0%)
Strand=Plus/Plus
Query 218587 GATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGGAACCTGGTT 218646
|| || |||||||| ||||| ||| | || | || |||||||| ||| ||||
Sbjct 27312 GACGGACTCAAGCCTGGTCAGCGAAAGGTGCTGTACGCATGTTTCAAGCGAAACGTGGTC 27371
Query 218647 CAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGCTACCATCAC 218706
| || ||||| | || | ||||||| || |||| | | ||| |||||| |||
Sbjct 27372 AAGGACGAAAAGGTTGTGGAGCTGGCTGGTTACGTCTCCGGACTGACTGCCTACCACCAC 27431
Query 218707 GGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTATGTGGGCAGTAAC 218766
||||| ||||||| |||| | ||| |||| || |||| |||||| |||
Sbjct 27432 GGTGAAGCCTCTCTGCAGCAGACCATCATTGGCCTGGCTCAAGACTTTGTGGGATCGAAC 27491
Query 218767 AACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGTTCTCGTCT 218810
||||| ||| ||||| |||| |||| | ||||||||||| ||
Sbjct 27492 AACATCAACGTGCTGGAGCCCAGCGGTAACTTTGGTTCTCGACT 27535
Score = 86.0 bits (94), Expect = 1e-11
Identities = 95/127 (75%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 216928 GAGGGTGTATATATTCCCGAGATGATCTTTGGGCATCTTTTGTCTGGCGAGAACTTTGAT 216987
||| |||| || ||||||||| |||| || || || || ||| ||||| |||||||||
Sbjct 25554 GAGCGTGTGTACATTCCCGAGCTGATTTTCGGTCACCTGTTGGCTGGCTCCAACTTTGAT 25613
Query 216988 GATACAGAGGAGCGCACCGGAGCTGGTCGCAATGGCTATGGTTCCAAGCTCACCAACATC 217047
|| || ||| || || | | |||||| ||||| |||||| | ||||| ||| ||
Sbjct 25614 GACACCGAGAAGAAGACTGTGGGTGGTCGAAATGGTTATGGTGCGAAGCTGTGTAACGTC 25673
Query 217048 TTCAGCA 217054
|||||||
Sbjct 25674 TTCAGCA 25680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1027825145294285
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |