Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_009011.2
Length=131331
Score E
Sequences producing significant alignments: (Bits) Value
seq373 105 6e-18
seq877 93.3 4e-14
>seq373
Length=44988
Score = 105 bits (116), Expect = 6e-18
Identities = 162/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212
||||| ||||| || | | ||| | || | ||||| || || || |||||||| |||
Sbjct 36088 ATACCACCACGAAGGCGGAGAACCAGGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCG 36029
Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272
| || || || ||||| || || ||||| ||||||||||||| |||||||||
Sbjct 36028 GAGAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGA 35969
Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332
|| || || || ||||| ||||| || | | || | |||||||| || |||
Sbjct 35968 GGGATACCCTCCTTGTCCTGGATCTTGGACTTCACATTGTCGATGGTGTCGGACGACTCG 35909
Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383
|| || | ||| | || |||||||| || || || || || |||||||||
Sbjct 35908 ACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 35858
Score = 105 bits (116), Expect = 6e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251
|| || || |||||||| ||||||| ||| || ||||| || || ||||||||| |
Sbjct 36563 TCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGGCCGTCTTCCAGCTGCTTACCAGCGAAA 36504
Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311
|| || ||||| |||||||||||||| || || ||||| |||||| || | |
Sbjct 36503 ATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTG 36444
Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371
|||| || || | || ||||| |||| ||| | || || || || || || || ||
Sbjct 36443 TCAATAGTATCAGATGACTCGACCTCCAGGGTGATGGTCTTTCCTGTGAGGGTCTTGACG 36384
Query 114372 AAAATCTGCAT 114382
|||||||||||
Sbjct 36383 AAAATCTGCAT 36373
Score = 86.0 bits (94), Expect = 5e-12
Identities = 130/185 (70%), Gaps = 0/185 (0%)
Strand=Plus/Minus
Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245
||||| || || || |||||||| ||| | || || || ||||| || || |||
Sbjct 36341 GTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCAAGCTGCTTGCCA 36282
Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305
|| ||||||||||||| ||||||||||| || || || ||||| ||||| ||
Sbjct 36281 GCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTG 36222
Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365
| | || | |||||| | ||| || || || | || | ||| ||||||||||| ||
Sbjct 36221 ACGTTGTCGATGGTGTCAGAGGACTCAACCTCGAGAGTGATCGTCTTGCCGGTCAGGGTC 36162
Query 114366 TTTAC 114370
|| ||
Sbjct 36161 TTGAC 36157
>seq877
Length=50207
Score = 93.3 bits (102), Expect = 4e-14
Identities = 135/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 114192 TCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAG 114251
|| || || |||||||| ||||||| || || ||| || || || || || || ||
Sbjct 31664 TCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAG 31605
Query 114252 ATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGT 114311
|| || ||||| |||||||| || ||||| || ||||| |||||| || | |
Sbjct 31604 ATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTCCTGAATCTTGGACTTGACGTTG 31545
Query 114312 TCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACA 114371
|| | |||||||| || || || || | ||| | ||| || || || || || || ||
Sbjct 31544 TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTGACG 31485
Query 114372 AAAATCTGCAT 114382
|||||||||||
Sbjct 31484 AAAATCTGCAT 31474
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 420129868456620
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |