Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq804 132 6e-26 >seq804 Length=175399 Score = 132 bits (146), Expect = 6e-26 Identities = 348/524 (66%), Gaps = 13/524 (2%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || ||| |||||||||||||| |||||||| || || || ||| ||| || Sbjct 35147 GGCAAAGTCCGTGTGCAGACCCTCGTCACGAGAGATGAGCTCGTTGGAAAAGGTCAGGCC 35206 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 ||||||||||| |||||||| | ||||||||| | ||| | ||| ||||||||| Sbjct 35207 GGGCATGAGACCTCGCTTCTTGAGCCAGAAAATGGAGGCAAAGGCACCGCTGAAGAAGAT 35266 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTC--- 126222 ||||| ||| || || |||| |||||||| |||||||| ||| || |||| Sbjct 35267 ACCCTCGACAGCGGCAAAGGCAACGAGACGCTGGGCAAAGGA---CGAGTTCTTGTCCTG 35323 Query 126223 AAACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTC 126282 | ||| |||||||| | ||||| || || || || | ||||| || || | Sbjct 35324 GATCCATCGAATCGCCCAGTCAGCCTTCTTGCGAATGCAAGGAATGGTCTCAATGGCGTT 35383 Query 126283 AAAGAGTTCCTTCTTTTCTGATG-GATCTTTGATGTACTTATCTATGAGTTTTGAATATG 126341 ||||| | || | | || | || ||||| || | || ||||| || || | Sbjct 35384 GAAGAGGTAGTTGCGCT-GGCTGTGCTCCTTGATATAAGTGTCGATGAGCAGGGAGTACG 35442 Query 126342 TTTCGCCGTGGACCAT-TTCATTATGGCACTGATACGCGTAGAAAGAGCGCGCTTCGCTT 126400 | ||| ||||| | | ||| || | ||| | |||| || |||| || ||| Sbjct 35443 TCTCGGAGTGGATGTTCTCCATCAT-GATCTGGAAGCCGTAAAAGCAGCGAGCCTCGGGG 35501 Query 126401 ATCTGTACCTCATCGGCAAAATTGTTATTGATATTCTCAAAAACAATTCCATCGGACCCA 126460 ||||| ||||| || || | | ||||| ||||| || || || | Sbjct 35502 ATCTGGACCTCGCCGCTGAAGCGCTCGACCAGGTTCTCGTTGACAATGCCGTCCGAGGCG 35561 Query 126461 GCAAAAAACGCCAGGATATACTTTATGAATTTCTGTTCATTCTCGTTCA---GGGTCTTC 126517 || || || |||||||| | ||||| | || || | ||||||| || | ||| Sbjct 35562 GCGAAGAAGGCCAGGATGTGAGAGATGAAGTACTTCTCGTCATCGTTCAGGCGGTTGTTC 35621 Query 126518 CAGTCGTCAAGATCCTTCGAGAGATCTACCTCCTCCGCAGTCCA 126561 ||||||| || ||||| || || || | |||||| || ||||| Sbjct 35622 CAGTCGTGCAGGTCCTTGGACAGGTCAATCTCCTCGGCGGTCCA 35665 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597346991775800