Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq373 100 3e-16
>seq373
Length=44988
Score = 100 bits (110), Expect = 3e-16
Identities = 153/218 (70%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275
||| ||||| | | || || || || | || || || || || |||||||| || |
Sbjct 36372 ACCACCGCGAAGACGGAGGACAAGGTGGAGTGTAGACTCCTTCTGGATGTTGTAGTCGGA 36313
Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335
|| ||| || |||| |||||||||||||| ||| | ||||| ||||||||||| |||||
Sbjct 36312 GAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCAAAGATGAGACGCTGCTGGTCCGGAGG 36253
Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCAC 64395
|| || || || || || || || ||| || || | || ||| || || ||
Sbjct 36252 GATACCCTCCTTGTCCTGGATCTTGGACTTGACGTTGTCGATGGTGTCAGAGGACTCAAC 36193
Query 64396 TTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGA 64433
|| | ||| | ||||||||||||| || || ||||
Sbjct 36192 CTCGAGAGTGATCGTCTTGCCGGTCAGGGTCTTGACGA 36155
Score = 98.7 bits (108), Expect = 1e-15
Identities = 140/197 (71%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || | || ||| || |||| ||||||||||||||
Sbjct 36055 GTAGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCAAGCTGCTTGCCA 35996
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | ||||| ||||||||||| ||||| || || || || || || || || |||
Sbjct 35995 GCAAAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTC 35936
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| || | || || | || || || | || | |||||||||||| | ||
Sbjct 35935 ACATTGTCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTC 35876
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 35875 TTGACGAAGATCTGCAT 35859
Score = 84.2 bits (92), Expect = 2e-11
Identities = 133/191 (70%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 64253 TCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAA 64312
|| || || |||||||| || | ||||| ||||||| |||||||| || || ||
Sbjct 36563 TCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGGCCGTCTTCCAGCTGCTTACCAGCGAAA 36504
Query 64313 ATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACC 64372
|| || ||||||||||| |||||||| || || || || || || || ||| ||
Sbjct 36503 ATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTCCTGAATCTTGGACTTGACGTTG 36444
Query 64373 TCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACG 64432
|| | |||||| | || || || | || | |||||| || || | || || |||
Sbjct 36443 TCAATAGTATCAGATGACTCGACCTCCAGGGTGATGGTCTTTCCTGTGAGGGTCTTGACG 36384
Query 64433 AAAATTTGCAT 64443
||||| |||||
Sbjct 36383 AAAATCTGCAT 36373
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499639272679400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |