Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07- 08] 885 sequences; 32,070,663 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq736 372 3e-98 >seq736 Length=134049 Score = 372 bits (412), Expect = 3e-98 Identities = 1097/1669 (66%), Gaps = 34/1669 (2%) Strand=Plus/Plus Query 93715 AATTACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGC 93774 || ||| | ||||||| |||||| || |||||| || ||||| || ||| | || ||| Sbjct 46533 AACTACCAATACTTTGGCTTCAAGACGCTGGAGCGATCATACCTTCTGAAGCTCGACGGC 46592 Query 93775 AGGGTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCAC 93834 | | || |||||| || || || || | ||||| || ||| | || || || || Sbjct 46593 AAGATTGTCGAGCGGCCACAACACATGATTATGCGAGTGGCCGTTGGCATCTGGGGAGAC 46652 Query 93835 GACATGCCGAATGTTTTGCGGGCTTTCAGAGACATGCGGGACAAGAGGTATACCATGGCC 93894 ||||| | ||| | | | | | |||| |||| | ||| ||| Sbjct 46653 GACATTGAGCGTGTCCTCGAGACATACCACCTCATGTCCAGCAAGTTCTTCACCCACGCC 46712 Query 93895 ACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATG 93954 |||| ||||| ||||| || || |||||| | ||| |||| || || |||||| || Sbjct 46713 TCCCCTACCCTCTTCAATGCTGGCACCCCGCAAGCCCAGCTGTCCTCATGCTTCCTGGTG 46772 Query 93955 ACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATC 94014 | |||| |||| ||| || || | |||| ||| ||| ||||| | || Sbjct 46773 GACATGAAGGACGACAGCATTGAGGGTATCTATGACACCCTGAAGACGTGTGCCATGATT 46832 Query 94015 TCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTAC 94074 || || || || || ||||| | | |||||| | | ||||||| || |||||| Sbjct 46833 TCCAAGATGGCTGGTGGCATCGGTCTGAACGTCCACCGCATCCGTGCCACTGGCTCCTAC 46892 Query 94075 ATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAAC 94134 ||| ||| ||||| ||||||||||||||| | |||| ||||| || |||||||||||| Sbjct 46893 ATCGCCGGCACCAACGGCACCTCCAACGGCATTATCCCCATGCTGCGAGTCTTCAACAAC 46952 Query 94135 GCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTC 94194 | || || ||||| ||||||||||| | | | ||| | || || |||| ||| Sbjct 46953 ACTGCCCGATACGTCGACCAGGGTGGCAACAAGCGTCCTGGTGCCTTTGCCATCTACCTC 47012 Query 94195 GAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGAT 94254 |||||||||||||| ||||| | ||| | || || || |||||||||||||| || Sbjct 47013 GAGCCCTGGCACGCCGACGTCTTTGACTTCCTTGATCTCCGCAAGAACCACGGCAAGGAG 47072 Query 94255 CTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGC 94314 || | ||| | ||| | ||| ||||| ||| | || || || || ||||| || Sbjct 47073 GAGGTTCGCGCCCGCGACTTGTTCCTTGCTCTGTGGATCCCCGATCTCTTCATGAAGCGT 47132 Query 94315 GTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCGAC 94374 |||||||| |||| | ||||| || | || ||||| ||||| || || || | ||| Sbjct 47133 GTCGAGAAGAACTTGGACTGGACGCTCATGTGCCCCAACGAATGCCCTGGTCTTGCTGAC 47192 Query 94375 GTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGG-CAAGGCCAG 94433 | || | ||||| | |||| | ||||| | |||| | || | | Sbjct 47193 TGCTACGGCGAGGAGTTTGAGGCTCTGTACGAAAAGTACGAGAGGGAGGGACGTGGTC-G 47251 Query 94434 GAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGG 94493 ||| || |||| |||||||||| | ||| |||| | ||| ||||| || Sbjct 47252 TAAGACCATCCGTGCTCAGAAGCTGTGGTACTCCATCCTGGAGGCCCAGACCGAGACTGG 47311 Query 94494 TACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 || |||| ||| | | |||||| | ||| |||| |||| ||||||| || || | | Sbjct 47312 TAACCCCTTCATGCTTTACAAGGACCACTG-CAACCGCAAGAGCAACCAGAAGAACTTGG 47370 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 | ||| ||||| || || ||||| ||||| | ||||| | | || |||||| Sbjct 47371 GCACCATCCGCAGCTCTAACCTCTGCACTGAGATCATTGAGTACTGTGCCCCCGACGAGG 47430 Query 94613 TTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCTACACGT 94672 | ||||| || ||| ||| ||| | ||| || | || || ||| ||||| Sbjct 47431 TCGCTGTCTGCAACTTGGCCTCTCTGGCCCTTCCCGCCTTTGT-CGA-----CTACA--A 47482 Query 94673 CTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCTT---GA 94729 | | ||| | | ||| | || ||||| | || | |||| ||||| | | Sbjct 47483 CGAGGGCTGC-TACGACTTCAAGAAGCTTCACGAAGTCAC--CAAGG-TGGTCGTCCGCA 47538 Query 94730 ACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACTCAAACC 94789 |||| ||| | | ||||| |||| |||||||||| |||||| ||| ||| Sbjct 47539 ACCTCAACCGCATCATCGATGTGAACCACTACCCCGTCGAGGAGGCTCGCAACAGCAACA 47598 Query 94790 TGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGATGATGC 94849 || || || || ||||| |||| ||||||||| | || |||||| | | ||| Sbjct 47599 TGCGCCACCGACCTATCGGTGTCGGTGTCCAGGGTCTTGCTGACGCGTTCCTCGCTCTGC 47658 Query 94850 GTCTGCCCTACGACTCTGTCGACGC-GGCGGGTTTGAATTTGAACATATTCGAAAGCATT 94908 ||||||||| || ||| ||| || ||| | |||| | | || ||||| | |||| Sbjct 47659 GTCTGCCCTTTGAGTCTCCCGAGGCTCGCGAG-CTGAACAAGCAGATCTTCGAGACCATT 47717 Query 94909 TATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGGCGGGCCACACGAA 94968 || | | ||| | || ||| | | | |||| || || || || | ||| Sbjct 47718 TACCATGCCGCCCTTGAAGCTTCCATGGAGATTGCCA---AGGTCGAGGGCCCCTATGAA 47774 Query 94969 TCGTTCCGCGGATCGCCCTTGGAAC--AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGA 95026 |||||| |||||||| || | | |||| || | |||| |||| | |||| || | Sbjct 47775 TCGTTCAAGGGATCGCC--TGCATCTGAGGGTATCCTCCAGTACGACATGTGGGACGTCA 47832 Query 95027 AGCCCTCGGGTCTGTACGACTGGGA--AGCTCTACGCGCTGATGTTATCAAACACGGTGT 95084 ||||||| | |||| || ||||| ||| | | || || | | | |||||||| Sbjct 47833 AGCCCTCCGACCTGTGGGAGTGGGACTCCCTCAAGGAGCAGA--TCAAGGAGCACGGTGT 47890 Query 95085 GAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAA 95144 ||| |||| || || || |||||||| ||| || | ||||| || ||||| Sbjct 47891 CCGCAACAGCTTGCTCGTCGCTCCTATGCCCACTGCCAGTACCTCTCAGATTCTGGGCAA 47950 Query 95145 CAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGA 95204 |||||| | ||||| |||| |||||||||| | ||| | | || || || || || || Sbjct 47951 CAACGAATGCTTCGAGCCCTACACCTCCAACATCTACCAGCGACGTGTCCTTGCTGGTGA 48010 Query 95205 ATTCCCCGTCATCAACAAGCACCTCCTACGGGACCT-GACGTCTCTGGGTGTGTGGGGTG 95263 |||| || ||||| || || |||||| | || | | || ||||| || Sbjct 48011 GTTCCAGGTTGTCAACCCTTGGCTTCTCAAGGACCTGGTCGACAC-CGGCCTGTGGTCTG 48069 Query 95264 ACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATCCCGCAAATAC 95323 || | ||||||| | | || ||||||||| |||||||||| || | || | Sbjct 48070 ACGCCATGAAGAACCGCATCATTGCCGAGAACGGCTCCATCCAGAACATTCCCAACATCC 48129 Query 95324 CGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCG 95372 | |||||||||||||| || ||||||||||| |||||||| | ||||| Sbjct 48130 CCGAGGACATCAAGGCCCTGTACAAGACCGTCTGGGAGATATCTCAGCG 48178 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494717727124600