Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Trichoderma_20parareesei_20[genbank_20GCA_5F001050175.1_202015-07-
08] 885 sequences; 32,070,663 total letters
Query= NC_011345.1
Length=155122
Score E
Sequences producing significant alignments: (Bits) Value
seq736 205 9e-48
seq804 201 1e-46
seq877 114 1e-20
seq373 113 4e-20
>seq736
Length=134049
Score = 205 bits (226), Expect = 9e-48
Identities = 743/1145 (65%), Gaps = 41/1145 (4%)
Strand=Plus/Minus
Query 153028 GGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAAG 153087
||||||| || || ||||| || || | || |||| | || | ||| ||| | |
Sbjct 48027 GGTTGACAACCTGGAACTCACCAGCAAGGACACGTCGCTGGTAGATGTTGGAGGTGTAGG 47968
Query 153088 GTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCCA 153147
| || ||| ||||||| ||||| || || |||| || | || || ||||| || |
Sbjct 47967 GCTCGAAGCATTCGTTGTTGCCCAGAATCTGAGAGGTACTGGCAGTGGGCATAGGAGCGA 47908
Query 153148 CCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCCC 153207
| | ||| || || | |||||| | || | ||||| | | | ||| ||||
Sbjct 47907 CGAGCAAGCTGTTGCGGACACCGTGCTCCTTGATCTGCTCCTTGAGGGAGTCCCACTCCC 47848
Query 153208 ACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTA--ACACTCCTCGACTGGCGGG 153265
|||| | || || | ||| ||||||||||||||| | | || |||| || ||
Sbjct 47847 ACAGGTCGGAGGGCTTGACGTCCCACATGTCGTACTGGAGGATAC-CCTCAGATGCAGGC 47789
Query 153266 ACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAG 153325
| || || | | ||| ||| ||| | ||| | || | ||| || ||
Sbjct 47788 GATCCCTTGAACGATTCA-TAGGGGCCCTCGACCTTGGCAATCTCCATGGAAGCTTCAAG 47730
Query 153326 CGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTC 153385
||| ||| ||| ||||| ||| ||| || || || || || || || |||
Sbjct 47729 GGCGGCATGGTAAATGGTCTCGAAGATCTGCTTGTTCAGCTCGCGAGCCTCGGGAGACTC 47670
Query 153386 GTACGGCATGCGCAGCAGC-ACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGG 153444
| |||| ||||| ||| | || ||||| || |||||||||| |||||| ||||| |
Sbjct 47669 AAAGGGCAGACGCAG-AGCGAGGAACGCGTCAGCAAGACCCTGGACACCGACACCGATAG 47611
Query 153445 GTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATAGTGATTGCGATCGATAA 153504
|||| || | ||||||| | || | | | ||| ||||| || |||||| |
Sbjct 47610 GTCGGTGGCGCATGTTGCTGTTGCGAGCCTCCTCGACGGGGTAGTGGTTCACATCGATGA 47551
Query 153505 TTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGG 153564
| |||||||||||| || ||||| || || | | | ||| |||| ||| || |||
Sbjct 47550 TGCGGTTGAGGTTGCGGACGACCACCTTGGTGACTTCGTGAAGCTTCTTGAAGTCGTAGC 47491
Query 153565 -----TCATT-TCGTCGACGCGTACGCATCGATTCACGGCAATAGACGCCAGATTACAGA 153618
|| || | |||||| || || | ||| | ||| |||| || ||||
Sbjct 47490 AGCCCTCGTTGTAGTCGACAAAGGCGG---GA---AGGGCCAGAGAGGCCAAGTTGCAGA 47437
Query 153619 CGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTT---GCTGCATT 153675
| || ||| |||| | | | ||||| | |||||| | ||||||||| |||||
Sbjct 47436 CAGCGACCTCGTCGGGGGCACAGTACTCAATGATCTCAGTGCAGAGGTTAGAGCTGCGG- 47378
Query 153676 TTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGT 153735
||| |||||| || | ||| ||||| ||||| ||||| ||| ||| | ||||||
Sbjct 47377 --ATGGTGCCCAAGTTCTTCTGGTTGCTCTTGCGGTTGCAGTGGTCCTTGTAAAGCATGA 47320
Query 153736 ACGGTCCGCCGGTCTCGACTTGCGTTTCGACGATAAACCTATGCAGGTCCTGCGCTCGCA 153795
| || || |||||| || | || | ||| | ||| | ||| || || |
Sbjct 47319 AGGGGTTACCAGTCTCGGTCTGGGCCTCCAGGATGGAGTACCACAGCTTCTGAGCACGGA 47260
Query 153796 CCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTCGCTCAAACTCGTCGC 153855
|| ||| || ||||| |||||||| |||||||| ||||||||| ||||
Sbjct 47259 TGGTCTTACGACCACGTCCCTCCCTCTCGTACTTTTCGTACAGAGCCTCAAACTCCTCGC 47200
Query 153856 CGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCGACCA---CATATCGT 153912
|||||||||| || || || || || | | || ||||| |||| ||| || | |
Sbjct 47199 CGTAGCAGTCAGCAAGACCAGGGCATTCGTTGGGGCACATGAGCGTCCAGTCCAAGT--T 47142
Query 153913 CGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACATGAGGTCGCGCG 153972
| | | ||| || |||||| ||||| || | ||| || || | | |||||| |
Sbjct 47141 CTTC-TCGACACGCTTCATGAAGAGATCGGGGATCCACAGAGCAAGGAACAAGTCGCGGG 47083
Query 153973 CCTTGCAATCCTCCGCGC--CCATGTTGCGTTTC--AGATTGAGCACGCTATAGATGTCG 154028
| || | ||||| | || || | | || | |||| || | | | ||| ||||
Sbjct 47082 C---GCGAACCTCCTCCTTGCCGTGGTTC-TTGCGGAGATCAAGGAAGTCAAAGACGTCG 47027
Query 154029 GCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACCTTTACGCTTT---CCGCCCTGATCG 154085
||||||||||| || | ||||| ||| | |||||| |||||| || ||||| |||
Sbjct 47026 GCGTGCCAGGGCTCGAGGTAGATGGCAAAGGCACCAGGACGCTTGTTGCCACCCTGGTCG 46967
Query 154086 ACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCTTGCGGTGCCG 154145
|||| || | | ||||||||||| |||| |||||| | |||| | | |||||||
Sbjct 46966 ACGTATCGGGCAGTGTTGTTGAAGACTCGCAGCATGGGGATAATGCCGTTGGAGGTGCCG 46907
Query 154146 TTGGT 154150
|||||
Sbjct 46906 TTGGT 46902
>seq804
Length=175399
Score = 201 bits (222), Expect = 1e-46
Identities = 514/767 (67%), Gaps = 33/767 (4%)
Strand=Plus/Minus
Query 52086 AACGATGACGAGCGCTATTTTATCAAGCACGTGTTGGCGTTCTTCGCCGCCGCCGATAGC 52145
|||||||||||| || || ||| ||| | |||| |||||||||||| | || ||
Sbjct 35608 AACGATGACGAGAAGTACTTCATCTCTCACATCCTGGCCTTCTTCGCCGCCTCGGACGGC 35549
Query 52146 ATCGTGAACATTAACCTCATCGAGTACATGCAGCGGAACGTTCCGGAACTC-GAGGCGCA 52204
|| || ||| ||||| ||||| | | |||||| | ||| || | | ||||| |
Sbjct 35548 ATTGTCAACGAGAACCTGGTCGAGCGCTT-CAGCGGCGAGGTCCAGATCCCCGAGGCTCG 35490
Query 52205 ATACTTTTATAATTTGCAAGTGCTCATCGAGTGCGTGCACACGGAGATGTACAATCTGCT 52264
| |||||| || || | | || ||| | | ||| | |||| |||| |||||
Sbjct 35489 CTGCTTTTACGGCTTCCAGATCATGATGGAGAACATCCACTCCGAGACGTACTCCCTGCT 35430
Query 52265 CATTGAGCAGCTGATAAAAGATGAGCACG---AGCGCGACACGCTGCTGAATGCGTTCGA 52321
||| || || || ||| | | |||||| ||||| || || | || || | ||
Sbjct 35429 CATCGA-CA-CTTATATCA-AGGAGCACAGCCAGCGCAACTACCTCTTCAACGCCATTGA 35373
Query 52322 GCACGTGCCGTGCGTTCGCAAAAAGGCTCAGTGGGCAATGAAGTGGATCGAGAGCGACAC 52381
| | | || ||| ||||||| |||||| | ||||| || |||||| || | | |
Sbjct 35372 GACCATTCCTTGCATTCGCAAGAAGGCTGACTGGGCGATTCGATGGATCCAGGACAAGAA 35313
Query 52382 CGCCACGCTGGCCGAGCGCATGGTGGCCTTCGCCATAGTCGAGGGCGTGtttttttCCGG 52441
| | | | ||| |||| | || ||||| ||| |||||||| | || || |||
Sbjct 35312 CTCGTCCTTTGCCCAGCGTCTCGTTGCCTTTGCCGCTGTCGAGGGTATCTTCTTCAGCGG 35253
Query 52442 CAGCTTTGCCGCCATCTTTTACATTAAAACGAAAGGCATAATGCCCGGCCTGACGTTCAG 52501
||||||| |||| || | | || | | ||| | |||||||||||||| ||
Sbjct 35252 TGCCTTTGCCTCCATTTTCTGGCTCAAGAAGCGAGGTCTCATGCCCGGCCTGACCTTTTC 35193
Query 52502 CAACGAGTTGATATCGCGCGACGAAGGACTGCACACGGACTTTGCGTGCCT-CT--ACT- 52557
||||||| | || || || ||||| || ||||||||||||||||| ||||| || |||
Sbjct 35192 CAACGAGCTCATCTCTCGTGACGAGGGTCTGCACACGGACTTTGCCTGCCTGCTGCACTC 35133
Query 52558 --AC---AAGACGCGCGTGACCGAAAAATTGGATTCGGACACGATCCTGAGCATGTTCAA 52612
|| |||| |||| | | || | |||||| ||| ||| |||
Sbjct 35132 TCACCTGAAGAACCGCGCCAGC-AAGGAGGTGATTCG----------TGA-CATCATCAC 35085
Query 52613 GGAGGCGGTGGCTATCGAAAAGGAGTTTTTTACGGCCGCGCTGCCGGTCGAGCTGCTGGG 52672
|| || || ||||| |||||||||| || | || ||||| || ||||||||
Sbjct 35084 CGACGCCGTCCGCATCGAGCAGGAGTTTTTGACCGAAGCTCTGCCTTGCGCCCTGCTGGG 35025
Query 52673 CATGAACGCGCAGTCCATGTGCGAGTACATCGAGTTTGTGGCGGATCGTCTGTTGGTGCA 52732
||||||| | | |||| ||||||| |||||||| || || || ||| |||| |
Sbjct 35024 CATGAACTCCAACCTCATGAAGCAGTACATTGAGTTTGTCGCCGACCGCCTGCTGGT--A 34967
Query 52733 GCTC-GGGCAGCCA-AAGTACTTCAACGCTCGCAATCCGTTTGAGTTTATGAACAACATT 52790
|||| |||| | | ||| | ||| | ||| || ||||| |||||| | ||||||
Sbjct 34966 GCTCTCGGCAACGAGAAGGTGTACAAGTCGTCCAACCCCTTTGACTTTATGGAGAACATT 34907
Query 52791 TCGCTTGAGGGCAAGACCAACTTTTTCGAGAAGCGAGTCGGCGAGTA 52837
|| || | |||||||||||||| || |||||||| |||| ||| ||
Sbjct 34906 TCCCTGGGCGGCAAGACCAACTTCTTTGAGAAGCGCGTCGCCGACTA 34860
>seq877
Length=50207
Score = 114 bits (126), Expect = 1e-20
Identities = 144/194 (74%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| || |||||||||||||||| || || |||||||| || || |||| | |
Sbjct 31665 CTCCTTCTGGATGTTGTAGTCGCTCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAA 31606
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540
||| || ||||| |||||||| || || || || ||||| ||| | || | || | |
Sbjct 31605 GATCAGGCGCTGCTGGTCCGGGGGGATGCCCTCCTTGTC-CTGAATCTTGGACTTGACGT 31547
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
|| || | |||||||| ||||||||||| | || | ||| || || || || || ||
Sbjct 31546 TG-TCGATGGTGTCGGAAGACTCCACCTCAAGGGTGATCGTCTTCCCCGTGAGGGTCTTG 31488
Query 138601 ACAAAAATCTGCAT 138614
|| |||||||||||
Sbjct 31487 ACGAAAATCTGCAT 31474
>seq373
Length=44988
Score = 113 bits (124), Expect = 4e-20
Identities = 144/196 (73%), Gaps = 2/196 (1%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| | || || |||||| || || || || | |
Sbjct 36052 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCA 35993
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTA-A 138539
|||| |||||||| ||||||||||| ||||| || ||||| ||| || || | |
Sbjct 35992 AAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTCACA 35933
Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599
||| || | |||||||| |||||| ||||||| || | || || || || || || ||
Sbjct 35932 TTG-TCGATGGTGTCGGACGACTCGACCTCGAGGGTGATGGTCTTGCCGGTGAGGGTCTT 35874
Query 138600 TACAAAAATCTGCATG 138615
|| || |||||||||
Sbjct 35873 GACGAAGATCTGCATG 35858
Score = 102 bits (112), Expect = 8e-17
Identities = 141/194 (73%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| || |||||||||||||||| ||||| ||| || || || ||||| | | |
Sbjct 36792 CTCCTTCTGGATGTTGTAGTCGCTCAAGGTACGACCGTCTTCCAGCTGCTTACCAGCAAA 36733
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540
||| | ||||| ||||| || || ||||| || ||||| ||| | || | || | |
Sbjct 36732 GATCAAGCGCTGCTGGTCAGGCGGGATACCCTCCTTGTC-CTGAATCTTCGACTTGACGT 36674
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
|| || | ||| || | || ||||| || | || | ||| ||||| ||||| || ||
Sbjct 36673 TG-TCGATGGTATCAGATGATTCCACTTCCAGAGTAATCGTCTTACCCGTCAGTGTCTTA 36615
Query 138601 ACAAAAATCTGCAT 138614
||||| ||||||||
Sbjct 36614 ACAAAGATCTGCAT 36601
Score = 95.1 bits (104), Expect = 1e-14
Identities = 130/182 (71%), Gaps = 0/182 (0%)
Strand=Plus/Minus
Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480
|||||||| || |||||||||||| | || || |||||| || || || || | |
Sbjct 36338 GACTCCTTCTGGATGTTGTAGTCGGAGAGGGTTCGGCCGTCCTCAAGCTGCTTGCCAGCA 36279
Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540
|||| |||||||| ||||||||||| ||||| || ||||| ||| || || |
Sbjct 36278 AAGATGAGACGCTGCTGGTCCGGAGGGATACCCTCCTTGTCCTGGATCTTGGACTTGACG 36219
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
| || | |||||| | ||||| ||||||| || | ||| || || ||||| || ||
Sbjct 36218 TTGTCGATGGTGTCAGAGGACTCAACCTCGAGAGTGATCGTCTTGCCGGTCAGGGTCTTG 36159
Query 138601 AC 138602
||
Sbjct 36158 AC 36157
Score = 93.3 bits (102), Expect = 4e-14
Identities = 139/194 (72%), Gaps = 4/194 (2%)
Strand=Plus/Minus
Query 138423 CTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATA 138482
|||||| || |||||||||||||||| ||| || ||| || || || ||||| | |
Sbjct 36564 CTCCTTCTGGATGTTGTAGTCGCTCAAAGTGCGGCCGTCTTCCAGCTGCTTACCAGCGAA 36505
Query 138483 GATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAA--T 138540
|| || ||||| ||||||||||| ||||| || ||||| ||| | || | || | |
Sbjct 36504 AATCAGGCGCTGCTGGTCCGGAGGAATACCCTCCTTGTC-CTGAATCTTGGACTTGACGT 36446
Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600
|| || | || || | ||||| ||||| | || | || || || || || || ||
Sbjct 36445 TG-TCAATAGTATCAGATGACTCGACCTCCAGGGTGATGGTCTTTCCTGTGAGGGTCTTG 36387
Query 138601 ACAAAAATCTGCAT 138614
|| |||||||||||
Sbjct 36386 ACGAAAATCTGCAT 36373
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496256910097200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |